Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05198 ATGATGGACTTTCACAAGCAATTGTTATTTTCCCTATTATGTCTTTCCCTAGTACTCTCAGGACAAATGAGGCTGCTAGCTGAGGCTCGCCCGCACCATCATCATGAGCACAATTATCCTTCAAAAAAATTGTTCGTTTTTGGAGACTCATATGCTGATACCGGCAACACTAAAAAAAATTCACCTGGCTCATGGAAACAACCGTATGGCATTACCTTTCCTGGAAAACCCGCCGGAAGATTCTCCGATGGTAGAGTCCTAACTGACTTTATTGCTAAGTATTTGGGACTGAGATCTCCACTACCCTACAAATTTAGGAAAGTGATGCCTCAATATTTGAAGTACGGGGTTAACTTTGCCTATGGTGGTACAGGTGTATTTGATACATCCTTTTCATACCCAAATATGACAATCCAGATCGATTTCTTCAACCAACTCATCCAAGAAAACGTGTTCACTCCCTCAGATCTTAGCAACTCTGTGGCTCTCGGATTGCCGTCTTTCATCGCCACATTGGTTAATCAAATCACAACAAATTTGATTCGGCTCCAAAAGTTAGGAGTGAAGAAAATTGTTGTGGATGATTTAGAACCCCTAGGTTGCCTTCCTGTTACCACAGCCCCAACCTCGTTCCAGCGTTGCAATAGCACCTCTAACGACCTCGTTATTCTCCATAACAAACTCTTAAACCAATCAGTTACCAAGTTGAACCAACAAAGCAAGGATCACACCACCTTCGTCATTCTTGACCTTTACGACAGTTTCATGTCAGTGCTTAACGACCCATCCACCAATAAAATTAAGGACCAACCCAAGCCATGTTGTGTTGGGGTAAGCAGCAAGTACTTTTGTGGGAGCGTGGACGAGAACAACGTGAAGAAATATACAGTTTGTGAAAATCCTAAATCAGCTTTCTTTTGGGATCTTTTTCATCCTACGCAAGCAGGACAAATGAGGCTGCTAGCTGAGGCTCCCCCGCACCATCATGAGCAGCACAATTATCCTTCAAAAAAATTGTTCGTTTTTGGGGACTCATATGCTGATACCGGCAACACTAGAAAAAACTCACCTGGCTCATGGAAACAACCGTATGGCATTACCTTTCCTGGAAAACCCGCCGGAAGATTCTCCGATGGTAGAGTCCTAACTGACTTCATTGCTAAGTATTTGGGATTGAGATCTCCACTACCCTACAAATTTAGGAAAGTGATGCCTCAATATTTGAAGTACGGGGTGAACTTTGCCTATGGTGGTACAGGTGTATTTGATACATCCTTTTCATACCCAAATATGACAATTCAGATCGATTTCTTCAACCAACTCATCCAAGAAAACGTGTTCACTCCCTCAGATCTTAGCAACTCCGTGGCTCTCGTCTCCGTCGCTGGAAATGACTACAGTTTTTACTTGTCCACAAATGGATCTGACCAGGGATTGCCGTCTTTCATCGCCACAGTGGTTAATCAAATCACAACCAATTTGATTCGGCTCCAAAAGTTAGGAGTGAAGAAAATTGTTGTGGATGGTTTAGAACCCGTAGGTTGCCTTCCTATTGCCACAGCCCCAACCGCGTTCAAGCTTTGCAATAGCACCTCTAACGACCTCGTTATTCTCCATAACAAACTCTTAAACCAATCCGTTACCAAGTTGAACCAAGAAAGCAAGGATCACACCACCTTCGTCATTCTTGACCTTTATGACAGTTTCATGTCAGTGATTAACGACCCATCCACCAATAAAATTAAGGACCAACTCAAGCCATGCTGTGTTGGGGTAAGCAGCAAGTACTTCTGTGGGAGCGTGGACGAGAACAACGTAAAGAAATATACGATTTGTGAAAATCCCAAATCAGCTTTCTTTTGGGATCTGTTTCACCCAACGCAAGCAGGTTGGAATGTTGTCTATAACAAACTGCACAAGGGAGCTCTTCATCAACTTCAATACTAG 1947 0.4304 MMDFHKQLLFSLLCLSLVLSGQMRLLAEARPHHHHEHNYPSKKLFVFGDSYADTGNTKKNSPGSWKQPYGITFPGKPAGRFSDGRVLTDFIAKYLGLRSPLPYKFRKVMPQYLKYGVNFAYGGTGVFDTSFSYPNMTIQIDFFNQLIQENVFTPSDLSNSVALGLPSFIATLVNQITTNLIRLQKLGVKKIVVDDLEPLGCLPVTTAPTSFQRCNSTSNDLVILHNKLLNQSVTKLNQQSKDHTTFVILDLYDSFMSVLNDPSTNKIKDQPKPCCVGVSSKYFCGSVDENNVKKYTVCENPKSAFFWDLFHPTQAGQMRLLAEAPPHHHEQHNYPSKKLFVFGDSYADTGNTRKNSPGSWKQPYGITFPGKPAGRFSDGRVLTDFIAKYLGLRSPLPYKFRKVMPQYLKYGVNFAYGGTGVFDTSFSYPNMTIQIDFFNQLIQENVFTPSDLSNSVALVSVAGNDYSFYLSTNGSDQGLPSFIATVVNQITTNLIRLQKLGVKKIVVDGLEPVGCLPIATAPTAFKLCNSTSNDLVILHNKLLNQSVTKLNQESKDHTTFVILDLYDSFMSVINDPSTNKIKDQLKPCCVGVSSKYFCGSVDENNVKKYTICENPKSAFFWDLFHPTQAGWNVVYNKLHKGALHQLQY. 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05198 648 CDD SGNH_plant_lipase_like 339 641 IPR035669 -
Seca8g05198 648 Gene3D SGNH hydrolase 29 325 IPR036514 -
Seca8g05198 648 Gene3D SGNH hydrolase 326 642 IPR036514 -
Seca8g05198 648 Pfam GDSL-like Lipase/Acylhydrolase 44 317 IPR001087 GO:0016788
Seca8g05198 648 Pfam GDSL-like Lipase/Acylhydrolase 339 636 IPR001087 GO:0016788
Seca8g05198 648 SUPERFAMILY SGNH hydrolase 335 639 - -
Seca8g05198 648 PANTHER OSJNBB0059K02.9 PROTEIN 327 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05198 Seca-Chr8 142049993 142061120 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05198 331 634 Pollen Coat Proteome AT1G75930 29.012 4.21e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05198 - - gmx:100789208 492.271