Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05182 ATGGTGGTGGCAGAATCTGAGATGAACTTTCAAGTTGAAGTGGATTCAGGTCAGCAAGAAGGCAACAAGAACCATCAATTCTCATCACTTGGAAGACAAGCCTCAATATACTCACTCACCCTTGATGAGTTCCAACACACTCTCTGTGAAGGTGGCAAGAATTTTGGGTCCATGAACATGGATGAGTTCCTCACCAGCATTTGGAGCGCTGAAGAGAGTCAAGCCATAAACTCCAACATTTACAACAACAACAATTTGGGTTTGAGTGAAACCTCAACAGAGAAAGTGATAAAGAAACAACCAAGTCTCTCAAAACAGGGGTCTCTGACAATTCCTGCACCTTTGCATAGGAAAACAGTGGAAGAGGTTTGGTCTGAGATACACAAAGGACAACAATCTCAGCAGCAGCAGCAACAACAGAGTGAAAATGTTCAGAATACCGAATCTGTCCCTCGCCAATCAACTTTTGGAGAGATGACTTTGGAGGATTTTTTGGTCAAAGCAGGGGTAGTTCGGGAACCAAGTTCAGCAATGCCTCTCCAAGCTTCTGCTTCTCTTCTTCATCATCATCATCATCACCAGATGCAGCAGCAGCAGCAACAGTATGGGATGTACACAAATAACAACCTTGCAGTGGGATCCTCTTCTTTTGTTGCTAGGACTGTGATGGGAGGAGGGAATGTGGTTGCGCCTACTTACCAGCCGGTGGCTCAGGGTGGTGGTGGTGGTGGTTTTGGGAGTAACATGGCAATGGCGGCGGCGCCGGTGAGTCCGGTTTCACCGGATGGTGGGTTGGGTGGGGGGGAAAAGCTTGGTGTTGGTGGTCAATTTGGGATGGAGATGGGAGTGTTGAGGGGAAGGAAGAGGATGTTGGATGGTCCTGTGGAAAAGGTGGTGGAGAGGAGGCAGAGGAGGATGATCAAGAACAGAGAATCAGCTGCAAGATCTAGAGCAAGGAAACAGGCATACACAGTTGAATTGGAAGCAGAATTGAACCAATTAAAAGAAGAGAACGCCCAACTTAAACTAGCCCTGGTCGAGCTTGAGAGGAGAAGAAAGCAACAGAATTTAGAGGAAATGAACGGGAGATCAGTTGAAACAAGCGCTGAGAGGGTCGAGAAGAATTTGATAGCATTGAAAAGGAACAGAAGTTGCCCTTTATTATAA 1167 0.4662 MVVAESEMNFQVEVDSGQQEGNKNHQFSSLGRQASIYSLTLDEFQHTLCEGGKNFGSMNMDEFLTSIWSAEESQAINSNIYNNNNLGLSETSTEKVIKKQPSLSKQGSLTIPAPLHRKTVEEVWSEIHKGQQSQQQQQQQSENVQNTESVPRQSTFGEMTLEDFLVKAGVVREPSSAMPLQASASLLHHHHHHQMQQQQQQYGMYTNNNLAVGSSSFVARTVMGGGNVVAPTYQPVAQGGGGGGFGSNMAMAAAPVSPVSPDGGLGGGEKLGVGGQFGMEMGVLRGRKRMLDGPVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLKEENAQLKLALVELERRRKQQNLEEMNGRSVETSAERVEKNLIALKRNRSCPLL. 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05182 388 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 304 319 IPR004827 GO:0003700|GO:0006355
Seca8g05182 388 Gene3D - 299 350 - -
Seca8g05182 388 MobiDBLite consensus disorder prediction 126 156 - -
Seca8g05182 388 SUPERFAMILY Leucine zipper domain 301 349 IPR046347 GO:0003700|GO:0006355
Seca8g05182 388 Pfam bZIP transcription factor 301 353 IPR004827 GO:0003700|GO:0006355
Seca8g05182 388 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 299 351 IPR004827 GO:0003700|GO:0006355
Seca8g05182 388 CDD bZIP_plant_BZIP46 301 355 - -
Seca8g05182 388 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 31 353 IPR043452 GO:0003700|GO:0045893
Seca8g05182 388 MobiDBLite consensus disorder prediction 125 156 - -
Seca8g05182 388 Coils Coil 317 363 - -
Seca8g05182 388 SMART brlzneu 297 359 IPR004827 GO:0003700|GO:0006355
Seca8g05182 388 FunFam protein ABSCISIC ACID-INSENSITIVE 5 isoform X1 299 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05182 Seca-Chr8 141826217 141828602 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05182 1 355 bZIP Transcription Factor Family AT2G36270 49.420 9.99e-102 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca8g05182 bZIP_1 6.6e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05182 K14432 - gmx:100790948 422.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05182 8 141826217 141828602 Seca8g05182 8 141826217 141828602 ECH
Seca8g05182 8 141826217 141828602 Seca2g04811 2 134650696 134652432 PCT