Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05179 ATGGCAACTTGTGTGTCAACAAATTTTGCACCTTGTAATGCTAGAAATTCAGCACGGGTGCTGACTTATGTTGGAGGAAGAACATTGACAGAGAGTTACCCTAGGAGAGCTTATTTCATGAAAATGTATGCCAGCAAGAATGGATTTTCAGGTGGCATCCGAAAGTCGGGTTTAGTTCAATTTAAGTGTTCAGCCAATTCCCACAGTGCCAGTCCATATCATAGCCAAGACCCTTTTCTACATTTACATCCTGAGGTGTCAATGCTTAGAGGAGAAGGGAGCAGCACAGTGAATGGCCCAAGAAAGGATAGTTCAGGTGGGGATTTGTTTGAGAGCTTAGAGGCTACATCTAGTCAAAGTAATTACAATGAAGCAAAGATCAAAGTTATTGGTGTCGGAGGTGGTGGGTCAAATGCAGTCAATCGCATGATAGAGAGTTCAATGCATGGTGTAGAGTTTTGGATTGTTAATACTGATGTTCAATCCATGAGAATGTCACCTGTCTTTCCTCAGAACCGTTTGCAAATTGGTCAGGAGCTTACACGAGGTCTTGGTGCTGGTGGTAACCCTGAGACTGGAATGAATGCTGCAAAAGAAAGCAAAGAATCAATAGAAGAGGCAGTTTATGGAGCTGATATGGTCTTTGTTACCGCTGGAATGGGTGGGGGAACTGGCACAGGTGGAGCTCCGATTATTGCCAGTATAGCAAAGTCAATGGGTATACTGACTGTGGGTATTGTCACCACCCCTTTCTCGTTTGAAGGACGAAAGAGAGCTATTCAAGCTCAAGAAGGAATTACAGCCTTAAGAGATAATGTTGACACACTAATAGTTATTCCAAATGACAAGCTACTAACGGCAGTTTCTCAATCTACCCCTGTAACTGAAGCATTCAATCTGGCTGATGATATTCTTCGACAGGGTGTTCGTGGCATATCTGATATTATTACAATACCAGGGTTGGTTAATGTAGATTTTGCTGATGTTCGAGCTATAATGGCCAATGCTGGTTCTTCACTGATGGGAATAGGAACTGCAACTGGGAAAACAAGGGCAAGAGATGCTGCATTAAATGCTATCCAGTCACCTTTACTAGATATTGGTATAGAGAGGGCTACTGGAATCGTATGGAACATAACTGGTGGGAGTGATCTGACCTTGTTTGAGGTAAATGCTGCTGCAGAGGTTATATATGACCTTGTAGACCCTACTGCTAATTTAATATTTGGAGCAGTAATAGATCCATCACTCAGTGGCCAAGTAAGCATAACATTAATTGCAACTGGATTCAAGCGTCAAGAGGAAAGTGAAGGGAGGCCTCTACAGGCCAGTCAGCTCACTCAGGGAGATACAACCATCAGTATCAATCGGCGACCTTCCTCTTTCACTGATGATAGTTTGGTTGAGATCCCCGAATTCTTAAAGAAGAAAGGACGCTCACGCTATCCAAGGGTTTGA 1458 0.4314 MATCVSTNFAPCNARNSARVLTYVGGRTLTESYPRRAYFMKMYASKNGFSGGIRKSGLVQFKCSANSHSASPYHSQDPFLHLHPEVSMLRGEGSSTVNGPRKDSSGGDLFESLEATSSQSNYNEAKIKVIGVGGGGSNAVNRMIESSMHGVEFWIVNTDVQSMRMSPVFPQNRLQIGQELTRGLGAGGNPETGMNAAKESKESIEEAVYGADMVFVTAGMGGGTGTGGAPIIASIAKSMGILTVGIVTTPFSFEGRKRAIQAQEGITALRDNVDTLIVIPNDKLLTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKTRARDAALNAIQSPLLDIGIERATGIVWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVIDPSLSGQVSITLIATGFKRQEESEGRPLQASQLTQGDTTISINRRPSSFTDDSLVEIPEFLKKKGRSRYPRV. 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05179 485 ProSitePatterns FtsZ protein signature 2. 212 233 IPR020805 GO:0005525
Seca8g05179 485 SUPERFAMILY Tubulin nucleotide-binding domain-like 125 323 IPR036525 -
Seca8g05179 485 Gene3D - 336 445 IPR037103 -
Seca8g05179 485 Gene3D Tubulin/FtsZ, GTPase domain 115 335 IPR036525 -
Seca8g05179 485 FunFam Cell division protein ftsZ, putative 336 444 - -
Seca8g05179 485 PRINTS Cell division protein FtsZ signature 213 233 IPR003008 GO:0005525
Seca8g05179 485 PRINTS Cell division protein FtsZ signature 304 326 IPR003008 GO:0005525
Seca8g05179 485 PRINTS Cell division protein FtsZ signature 327 348 IPR003008 GO:0005525
Seca8g05179 485 PRINTS Cell division protein FtsZ signature 241 262 IPR003008 GO:0005525
Seca8g05179 485 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 112 442 IPR045061 GO:0003924|GO:0005525
Seca8g05179 485 NCBIfam cell division protein FtsZ 116 442 IPR000158 GO:0003924|GO:0005525
Seca8g05179 485 CDD FtsZ_type1 137 429 IPR000158 GO:0003924|GO:0005525
Seca8g05179 485 Pfam FtsZ family, C-terminal domain 337 431 IPR024757 -
Seca8g05179 485 SUPERFAMILY Tubulin C-terminal domain-like 319 433 IPR008280 -
Seca8g05179 485 Pfam Tubulin/FtsZ family, GTPase domain 126 287 IPR003008 GO:0005525
Seca8g05179 485 SMART Tubulin_C_4 322 439 IPR018316 -
Seca8g05179 485 SMART Tubulin_4 126 320 IPR003008 GO:0005525
Seca8g05179 485 FunFam Cell division protein FtsZ 117 335 - -
Seca8g05179 485 Hamap Cell division protein FtsZ [ftsZ]. 122 438 IPR000158 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05179 Seca-Chr8 141797910 141803664 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05179 216 424 PP2C-type Phosphatase Gene Family AT1G75010 23.874 5.26e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05179 K03531 - gmx:100784356 803.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05179 8 141797910 141803664 Seca8g05179 8 141797910 141803664 ECH