Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05112 ATGGTGAAGAAAATGAAGCTTCCTTCTCTTCTTGTGAAGAACACAAATGTAAGATCCTCTCCTTCATGGGCCTGGCCATATTGCCACCAACCAAGAACCCTTTCTTTCAGAGCCGACAACGACGTCGTATTCAAAACCATTAACTCAGCCTACTTAGACGCCGCCACCAACGCGGAGGAAGAAAGCCCCGAATCGTTTTTCACCGAATCTCCCGTTTCCGCGAGCTTCTCAACGGCTTCGGAAGAAGATTCTAGAGACTTAATCGAGACAATTATTACTCACGGTTTGCGTTCGGATCGGCTTTTCTTCGAGCCAGATGAGACCAGCTCCATAGTAGAGGCCAAAGCTTATTCTGGAACCTTCTTCCCATTCAAAGACAGCGCCGTTGTGCTGTCGATGGATTCACGTGACCCTTACGTGGATTTCAAAAAGTCCATGGAGGAGATGGTTGAGTCTCATGGTGTCAACGATTGGGAGGGTCTCGAGGAGCTTTTGTGTTGGTATCTTAAGGTCAACGGGAAAATCAATCACGGTTATATTGTTAGCGCTTTTGTTGATTTATTAGTTGGTTTAGCATTTGCTTCAGCTACTACTTCTACTACTACTACAGGTTCTCCTTCTCCTTCTTCTCCTTTATCGTTTGATAGTTCTTCTTCTTGTAGCACTCGTTGTGTTTCGTGTTTAGAAGGTGATGAACAGGTGGAGCTTGATGCTCCTCCTTGTTATTCTTATTCACCTTCTCTGTTAGAACAAGTTAAGGAAGATGACGACTCTTCCTCTTCAAACGCATGA 792 0.4482 MVKKMKLPSLLVKNTNVRSSPSWAWPYCHQPRTLSFRADNDVVFKTINSAYLDAATNAEEESPESFFTESPVSASFSTASEEDSRDLIETIITHGLRSDRLFFEPDETSSIVEAKAYSGTFFPFKDSAVVLSMDSRDPYVDFKKSMEEMVESHGVNDWEGLEELLCWYLKVNGKINHGYIVSAFVDLLVGLAFASATTSTTTTGSPSPSSPLSFDSSSSCSTRCVSCLEGDEQVELDAPPCYSYSPSLLEQVKEDDDSSSSNA. 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05112 263 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 65 191 IPR038933 GO:0045892
Seca8g05112 263 ProSiteProfiles OVATE domain profile. 131 190 IPR006458 -
Seca8g05112 263 MobiDBLite consensus disorder prediction 199 218 - -
Seca8g05112 263 Pfam Transcriptional repressor, ovate 135 191 IPR006458 -
Seca8g05112 263 NCBIfam uncharacterized plant-specific domain TIGR01568 130 192 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05112 Seca-Chr8 141102176 141102967 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Seca8g05112 Ovate 7.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05112 - - gmx:100803791 251.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05112 8 141102176 141102967 Seca8g07931 8 176978872 176979600 ECH
Seca8g05112 8 141102176 141102967 Seca8g05112 8 141102176 141102967 ECH