Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05099 ATGGCTGAGGCTGACAACAAACAACAACCAGAATTGAACCCTGCAAGTGCAAGTGCAAACTACGACCCCTCTATTCCACCAGCGGAACAACCGCGCCACCGTGGCAGAAAATGCTCATGTTGTTGCTGCCTCTTTCGCATCTTGTGGTGGTTTCTCGTCTCCATCATCGTCCTCTTTTGCATCGTGATCCTCGTCTTGTGGATCCTCATCCAACCCCACTCCTTCAAATATCACGTGACAGAAGCCAAACTCACCCAATTCAACTACACAGCCAGCAACACCCTCCGATACAACCTCGTCGTCAACTTCACTGTCCGCAACCCAAACAAAAAGCTCAAGATCTACTACGATGTGGCGGAAGCCAACGCTTTCTATCAGGGCTCTAATTTCTCCGCAACAAACGTGATCATGCCTTGGCGGTCCTACCTCCAGAACACCAAGAGCACCGACCTTATGAGCGCTGTTTTCTCTGGCCAGCGCGTGATGATGCTCGATCACAATGAGTTTGACGAAGACAAAAAGGTTGGGGCTTTCCCTATCGATATCAAGCTCTACTTCAGGATTAGGTTCAAGCTTGGTGACTTCATACCCGGCGACATGAAGCCCAAGGCCAAATGTGCGCTTAAGGTTCCTTCTAGTTCTGATGGAAAAATGGTGGATGCGTTTGACCCCACCACGTGCGAGAGATCACTTTACCAACGTCTTCAAAATTCGAATCGATTAGTTGAGTTTTGCTCTTCTCTGCTTCAAAGAGCCATGTCCCATTTGAACGGCGCCTACTACGGCCCCTCCGTTCCGCCGCCACCAAAATCCTACCACCGCCCAAGCCGAGGCAGTAGCTGCTGCGGCGGCTGCTTCAGCTGTTGCTGCGGCTGCATCTTCAATTGCATCTTCAGCATCCTCTGCAAAATCTTAACCACCATCCTCATCATCGTGGCCATCGTCGCTCTTCTCTTCTGGTTCATCGTGCGCCCCAACGTGGTCAAATTCCGCGTGACCGATGCATCGCTCACTCAATTCACCTACACCAATAACACGCTCCACTACAACCTCGATCTAAACATCACGATCCGCAACCCTAACAGGAGGGTCGGCATCTACTACGACTACATCGAAGCGAACGCGTTTTACCAGGATGTGAGGTTCAGTTCCCAGACGTTGGGGAACTTTTTCCAGCACCACAAGAACACTAGCGTGTTGAGCCCTGTGTTCAAAGGGCAGCAGGTGATGCCCCTCGGAGAAGACCAGACTAAAGAGCTGAATAAGGACAAGAGTGATGAGGTTTACCATATCGATGTGAAGCTGTTTCTTAATGTGAGGTTCAAGTTGGGTTTGTTTAAGAGCGGGACGGCCAAGCCCAAGGTTCGTTGTGACTTGCAGGTTCCCCTGAAATCACACAACGGAACCTCGTCGACCACTGGATTTCAGGCCACCGATTGCGATTGGGATTACAAATGGATGCGGATCTTTTAG 1473 0.5058 MAEADNKQQPELNPASASANYDPSIPPAEQPRHRGRKCSCCCCLFRILWWFLVSIIVLFCIVILVLWILIQPHSFKYHVTEAKLTQFNYTASNTLRYNLVVNFTVRNPNKKLKIYYDVAEANAFYQGSNFSATNVIMPWRSYLQNTKSTDLMSAVFSGQRVMMLDHNEFDEDKKVGAFPIDIKLYFRIRFKLGDFIPGDMKPKAKCALKVPSSSDGKMVDAFDPTTCERSLYQRLQNSNRLVEFCSSLLQRAMSHLNGAYYGPSVPPPPKSYHRPSRGSSCCGGCFSCCCGCIFNCIFSILCKILTTILIIVAIVALLFWFIVRPNVVKFRVTDASLTQFTYTNNTLHYNLDLNITIRNPNRRVGIYYDYIEANAFYQDVRFSSQTLGNFFQHHKNTSVLSPVFKGQQVMPLGEDQTKELNKDKSDEVYHIDVKLFLNVRFKLGLFKSGTAKPKVRCDLQVPLKSHNGTSSTTGFQATDCDWDYKWMRIF. 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05099 490 PANTHER OS05G0367900 PROTEIN 299 466 IPR044839 GO:0098542
Seca8g05099 490 MobiDBLite consensus disorder prediction 1 35 - -
Seca8g05099 490 Pfam Late embryogenesis abundant protein 354 457 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05099 Seca-Chr8 140816396 140827282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05099 322 474 SNARE and Associated Proteins AT1G32270 40.260 5.21e-27 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05099 - - aprc:113873272 333.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05091 8 140752408 140757969 Seca8g05099 8 140816396 140827282 PCT