Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05086 ATGGGGATACCACAAGCCATGGGTGCTCTCAGGGAAAGAGCGGCGTTCGTGAAGGAGTCGCTGCACAAGAGCCAGACCATCACCGATAATATGGTCTCCATTCTCGGTTCCTTCGATCACCGTCTCTCCGCCCTTGAGACCGCCATGCGTCCCACTCAGATAAAAACGCATTCGATTCGAAGTGCACATGATAATATTGACAAGACTCTAAAGGCAGCAGAGGGGATTTTGGCGCAATTCGACCAGACTCGCAAGGCAGAGGCTAAAATACTGCGAGGGCCACATGAGGATCTAGAGAGTTATTTAGAAGCAATTGATCAGCTGAGAGCTAATGTACGTTTCTTCAGCAGCAAAAAGAGTTTCAAAAGTAGTGAAGGTATTGTTAACCATGCCAACAGCTTGCTTGCTAAAGCTATCTCAAAGCTAGAAGAGGAGTTCAAACATCTTTTGACAAATTACAGCAAGCCTGTGGAACCTGACCGCCTTTTTGACTGCTTACCAAACTCTCTGAGGCCATCGGCTTCTGGGCAGCAAAGTGAGGGTGGTGGCAAAAACCATTCAGAAAAAAAAAAAATGGAAACTGTCACCTTCACACTTCCAACCCTCATTCCACCCAGAGTTATACCTTTGCTACATGATTTAGCACATCAAATGGTTCAAGCTGGCCATCAACAACAGCTATTTCGAATCTACAGAGACACCCGTGCTACAGCCCTCGAACAGAGTCTTAGGAAGTTAGGTGTAGAGAGGCTGAGTAAGGATGATGTTCAGAAAATGCAATGGGAGGTTTTGGAGGCTAAGATTGGGAACTGGATTCATTACATGAGGATTGCTGTCAAATTGCTGATTTCTGGGGAAAAGAAAATCTGTGATCAAGTATTTGATGGTGTTGATTCTTTGAGAACTCAATGTTTTGCTGAAGTCACTGCTAGCAGTGTGTCTATGCTTCTTAGTTTTGGAGAGGCTATTGCCAAAAGCAAGAGGTCACCTGAAAAATTATTTGTCCTTCTAGACATGTATGAGATAATGAGAGAGCTTCAGCCAGAGATTGAGACACTGTTTGAAAGTAAAGCTTGCACTGAAATGCGGGAAGCTGCAATGAGTTTGACAAAGCGACTAGCTCAGACGGCCCAAGAAACCTTTGGTGACTTTGAGGAAGCAGTTGAAAAAGATGCTACTAAAACTGCTGTGCTAGATGGAACTGTCCACCCTCTGACTAGCTATGTGATCAATTATGTGAAGTTTCTCTATGATTATCAATCAACTCTGAAACAACTTTTTCAAGAGTTTGATCCTAACGATCCAGAATCTCAGTTAGGATCTGTTACAACAAGGATTATGCAGGCTCTTCAGAATAACCTAGATGGAAAATCAAAACAATATAGAGACCCAGCGTTAACTCAGCTGTTTCTTATGAATAATATCCATTACATAGTAAGATCAGTGAGAAGGTCAGAGGCAAAGGACATGTTGGGAGATGACTGGGTACAAATACACAGAAGAATTGTCCAGCAGCATGCAAATCAGTATAAAAGGATCTCTTGGGCAAAGATTTTGCAATGCCTTACTGTCCAAGGAGCTAATTCATCCGGTGGAGGGGACAGCAACAGTGGAGTTTCAAGAGCAATGATTAAAGATAGATTCAAGACCTTTAACATTCAATTTGAGGAGCTTCATCAGAGACAATCTCAATGGACTGTTCCAGATAGTGAGTTGCGTGAATCACTTAGATTGGCTGTTGCTGAGGTTTTGTTACCTGCCTATAGATCTTTCCTTAAACGTTTTGGGCCCATGATTGAGAATGGCAAAAATCCTCAGAAGTACATCAGATACTCTCCCGAGAACCTTGAGCAGATGCTCGGTGAATTTTTCGAGAGCAAGACGTGGGGTGAACAGAAGAGGTGA 1905 0.4315 MGIPQAMGALRERAAFVKESLHKSQTITDNMVSILGSFDHRLSALETAMRPTQIKTHSIRSAHDNIDKTLKAAEGILAQFDQTRKAEAKILRGPHEDLESYLEAIDQLRANVRFFSSKKSFKSSEGIVNHANSLLAKAISKLEEEFKHLLTNYSKPVEPDRLFDCLPNSLRPSASGQQSEGGGKNHSEKKKMETVTFTLPTLIPPRVIPLLHDLAHQMVQAGHQQQLFRIYRDTRATALEQSLRKLGVERLSKDDVQKMQWEVLEAKIGNWIHYMRIAVKLLISGEKKICDQVFDGVDSLRTQCFAEVTASSVSMLLSFGEAIAKSKRSPEKLFVLLDMYEIMRELQPEIETLFESKACTEMREAAMSLTKRLAQTAQETFGDFEEAVEKDATKTAVLDGTVHPLTSYVINYVKFLYDYQSTLKQLFQEFDPNDPESQLGSVTTRIMQALQNNLDGKSKQYRDPALTQLFLMNNIHYIVRSVRRSEAKDMLGDDWVQIHRRIVQQHANQYKRISWAKILQCLTVQGANSSGGGDSNSGVSRAMIKDRFKTFNIQFEELHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFLKRFGPMIENGKNPQKYIRYSPENLEQMLGEFFESKTWGEQKR. 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05086 634 SUPERFAMILY Cullin repeat-like 76 625 IPR016159 -
Seca8g05086 634 PANTHER EXOCYST COMPLEX PROTEIN EXO70 57 625 IPR004140 GO:0000145|GO:0006887
Seca8g05086 634 Gene3D Exocyst complex component Exo70 75 634 - -
Seca8g05086 634 MobiDBLite consensus disorder prediction 164 190 - -
Seca8g05086 634 Pfam Exo70 exocyst complex subunit 270 621 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05086 Seca-Chr8 140655804 140662830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05086 1 634 EXO70 exocyst subunit family AT5G52340 79.874 0.0 1060
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05086 K07195 - gmx:100779774 1135.17