Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05064 ATGGCGGCTGTGCAGGTTAGTGACAGAAAATGGTCTGATACCGAAGAAGAAGAAAGAGATAAACAAAACGACAACCCGGTATCTATGGATAAATTTGTGCTAGAATCTGTGAGGGACAAGAAAACTCTTGTGTGGGAAGTGAGGTACAAGGTGGCTTTAGGTGTGATCAATGCACTTTGTTATCTTCATTGGGATATTAAGTCAGATAATGTTTTGGACATGAATTTCAACACCAAGCTTAGGGATTTTGGGATAGCAAAATTGGTGGATACAAGATTGAGGACTCATAGGGCAGGGGTGGTTGGGACATGTGGGTATCTGGCCCTGGAATGA 333 0.4264 MAAVQVSDRKWSDTEEEERDKQNDNPVSMDKFVLESVRDKKTLVWEVRYKVALGVINALCYLHWDIKSDNVLDMNFNTKLRDFGIAKLVDTRLRTHRAGVVGTCGYLALE. 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05064 110 MobiDBLite consensus disorder prediction 1 27 - -
Seca8g05064 110 ProSiteProfiles Protein kinase domain profile. 1 110 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g05064 110 SUPERFAMILY Protein kinase-like (PK-like) 38 110 IPR011009 -
Seca8g05064 110 MobiDBLite consensus disorder prediction 9 26 - -
Seca8g05064 110 PANTHER - 28 109 - -
Seca8g05064 110 Gene3D Transferase(Phosphotransferase) domain 1 27 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05064 Seca-Chr8 140329387 140331429 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05064 43 110 Receptor kinase-like Gene Family AT5G65600 47.436 2.74e-16 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Seca8g05064 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05064 - - gmx:100784490 96.2857