Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05025 ATGGGCATCCTCCAACTCTACAGCGACGGCACCGTTTCCCGCTCCGACATACAATTCCCGGTTTCCCCCGCCACTCACGACCACCTCGTAACCTTCAAAGACTTCCTCTTCTGCAAAAAATTCAACCTTCACCTTCGTCTCTACAAACCCACCTCCAACAACAACAACAACGAGAAGCTACCTGTGATCATGTTCCTCCACGGTGGTGGTTTCTGCTTCGGTTCCCGCACCTGGCCCCACAGGCACACCCGCTGCGTGCGCCTCGCCTCGGGGCTACGCGCCATCGTCGCCGCGCCTGACTACCGCTTGGCGCCGGAGCACCGTCTCCCCGCGGCGGTGGATGACGCCGTCGAGGCCGTTAGGTGGCTACAGAGGCTGGGGCTGAGGGACCACGGTGGGGACGAGTGGTTGAACCCGCAGGGCGTTGACTTTGACTGCGTGTTCGTCATGGGCGACTCCTCTGGAGGTAACATCGCGCACCACCTCGCGGTTCGGTTCGGTCCCGGTTCGAGGGAGATGGATCCGGTTCGGGTACGAGGTTACGTGTTGCTGGGCCCATTTTTCGGTGGGGTGGTTCGGACCAGGTCGGAGGAGGGTCCCCCGGAACAAATGCTGAGCCTAGAGATACTAGACAGGTTTTGGAGGCTGTCGATGCCTGTTGGAGAAAGTAGAGACCACCCATTGGCGAACCCATTTGGACCTGACAGTCCAAACCTTGATCAAGTGAAGCTTGACCCTATTTTAGTAATAGTTGGTGGCAATGAATTACTGAAGGACAGAGCAACCGACTATGCAACAAGGTTAAAAGGATTAGGGAAGAACATTGAATACATTGAGTTTGAGGGGAAGGAACATGGCTTTTTCACTCACGATTCATACTCAGAAGTTGCAGAAGAGGTCGTGCAAATCCTTAAACGATTCATGCTTGAAAATTCTAAATAG 942 0.5488 MGILQLYSDGTVSRSDIQFPVSPATHDHLVTFKDFLFCKKFNLHLRLYKPTSNNNNNEKLPVIMFLHGGGFCFGSRTWPHRHTRCVRLASGLRAIVAAPDYRLAPEHRLPAAVDDAVEAVRWLQRLGLRDHGGDEWLNPQGVDFDCVFVMGDSSGGNIAHHLAVRFGPGSREMDPVRVRGYVLLGPFFGGVVRTRSEEGPPEQMLSLEILDRFWRLSMPVGESRDHPLANPFGPDSPNLDQVKLDPILVIVGGNELLKDRATDYATRLKGLGKNIEYIEFEGKEHGFFTHDSYSEVAEEVVQILKRFMLENSK. 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05025 313 PANTHER ARYLACETAMIDE DEACETYLASE 5 288 - -
Seca8g05025 313 SUPERFAMILY alpha/beta-Hydrolases 17 308 IPR029058 -
Seca8g05025 313 Gene3D alpha/beta hydrolase 3 312 IPR029058 -
Seca8g05025 313 Pfam alpha/beta hydrolase fold 63 288 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05025 Seca-Chr8 139634921 139644239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05025 2 307 Carbohydrate Esterase AT5G16080 34.185 2.08e-53 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05025 - - gmx:100801473 502.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05025 8 139634921 139644239 Seca8g05025 8 139634921 139644239 ECH
Seca8g05025 8 139634921 139644239 Seca2g04175 2 125909154 125911596 ECH
Seca8g05025 8 139634921 139644239 Seca2g04175 2 125909154 125911596 PCT