Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04981 ATGAACGTGGAATCTTTCTCTCAGCTCCCGTTCATCCGCCCAGCACCCTCCACCACCAAAGAGAAAGGCATCCGTCTCTTCGGCATCGAATTCGGATCCACGGAGGACTCAGAGTCAGGAGAAACAACCACCAATGCATTCGAAGTGGAAAGCAACAAGCTGGACAACAACAACAACAACAACAGTAGCACAGCAGAGAACGGAGAGAGCAGCAGCAGCAGGAGATTCGAATGCCACTACTGTTGCAGAAACTTCCCAACCTCACAAGCCTTAGGAGGTCACCAAAACGCACACAAAAGAGAGCGCCAACACGCCAAAAGAGCACACCTTCAGTCCGCTATGGTTCACGGTAGCACCACCTTCTCCGACCACCACCACCACCACCACCTTTATCCCCTAATGAACTACAGGTTCACCTCTACCCCAACCACACCAATGCCTTCTTATCCAACATGGAACTCCTCCTCCAATGCCACTACTACTAGCACCGCTCTTGAATCTCACTCTCACTCTCACTCTCACCACCAACAGCAACAACCTATTAATGGTAGCCCCTTGGCTTTTTGGAGAATCCCAAACGGCACCGTTCATAGTAGTAACCCTACTTCTTCTTCTTTCAACCATCATCCCAGCTTGCCCTTGCTTGCTGGTGAGGAAGTGAGAGACTCTCATCAAGTTGGAATTGCCACTACTGCAGGTTCACAAAACCGGTACGTTTATGACTCCAAACGTAGCACTACTACTACTGTCCATGACCATGTGGGGATGATGGAAAGGGGTATGAGACAGTTGGGAGCGCATGAACATTTTGTCGAAACACACGTGTGGCTAAATCCATCATATTGTCCAGGCAGGTGGGGTGATGAGAGAGGTGGGTTTTCTGATTCAATGCAATGTATTGTGATAGGTCATGATAAGGTTTGA 924 0.4913 MNVESFSQLPFIRPAPSTTKEKGIRLFGIEFGSTEDSESGETTTNAFEVESNKLDNNNNNNSSTAENGESSSSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSAMVHGSTTFSDHHHHHHLYPLMNYRFTSTPTTPMPSYPTWNSSSNATTTSTALESHSHSHSHHQQQQPINGSPLAFWRIPNGTVHSSNPTSSSFNHHPSLPLLAGEEVRDSHQVGIATTAGSQNRYVYDSKRSTTTTVHDHVGMMERGMRQLGAHEHFVETHVWLNPSYCPGRWGDERGGFSDSMQCIVIGHDKV. 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04981 307 SUPERFAMILY beta-beta-alpha zinc fingers 73 104 IPR036236 -
Seca8g04981 307 MobiDBLite consensus disorder prediction 153 180 - -
Seca8g04981 307 ProSitePatterns Zinc finger C2H2 type domain signature. 78 98 IPR013087 -
Seca8g04981 307 ProSiteProfiles Zinc finger C2H2 type domain profile. 76 103 IPR013087 -
Seca8g04981 307 PANTHER ZINC FINGER PROTEIN GIS 1 249 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Seca8g04981 307 MobiDBLite consensus disorder prediction 153 167 - -
Seca8g04981 307 MobiDBLite consensus disorder prediction 50 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04981 Seca-Chr8 139037585 139039116 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04981 1 208 C2H2 Transcription Factor Family AT2G41940 38.362 2.73e-34 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04981 - - gsj:114391971 316.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g04981 8 139037585 139039116 Seca8g04981 8 139037585 139039116 ECH