Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04967 ATGACAGGTTCAAGACAAAGCCTTCCAGAATTCCAAACTGAAATAACAATTTTATCCAAAATTTTCCATCGCCACCTTGTTTCACTAGTTGGTTTTTGTGAAGAAAATTCAGAAATGATACTTGTGGTTGAAAATGGGTGA 141 0.3475 MTGSRQSLPEFQTEITILSKIFHRHLVSLVGFCEENSEMILVVENG. 47
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04967 46 Pfam Protein tyrosine and serine/threonine kinase 5 44 IPR001245 GO:0004672|GO:0006468
Seca8g04967 46 SUPERFAMILY Protein kinase-like (PK-like) 4 44 IPR011009 -
Seca8g04967 46 PANTHER OS07G0166700 PROTEIN 4 45 IPR045272 GO:0004714|GO:0006468
Seca8g04967 46 Gene3D Phosphorylase Kinase; domain 1 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04967 Seca-Chr8 137844636 137844776 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04967 2 44 Receptor kinase-like Gene Family AT2G23200 74.419 4.50e-16 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Seca8g04967 PK_Tyr_Ser-Thr 2.2e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04967 - - gmx:100797031 79.7221