Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04966 ATGAGAATCCGAAAGAGGCAAGTACCTTTCCCTCTCTTGCCGGTGACTCTCTCAGATCCCAACCTGATCAACCGGTCACCGGTGTTGGTGCAACTCAACGATGCTTCAACCACCTCACCAAAACCTTCTTGCACTCATGCCTCGGCTACTGCACCGCTATCCTTCTTGGATCCTCCTCAGCCGTCTGATCAGCCACTCCCACCGATCGGGAAACCAACCAACGGCCCTGATGATTCCTTCGCACACAGGAGGCAGGACAAGAAGCAAGGATGTTTGGTGGAAGGAGAGGGACAGAAGGGTAATGATACCAGGAAAGGAAGCATCTTGAGTTCAGAAATGCCAAGTGAAGTCATCTCACCCTCCTCAAGCCCTCTTAATTCTAAACAAGATGGGAGATGGTGTGAGGGAGAGAAAGCATTTCCATTCAAGAAAAGAAGAGGAAGCTTCGAGAATGTTGCAATAGAGGATAGCATTAGCATTAACAATGATAATGGTAACAAGAAGAAGATGAAGACAAAGAGAAGATTGAAGACAAAGATGAACAAGAAATGTTTGGGCCAAGATGATAGTAATAATGAATTAGATGAAGAGGTGGTGATGAGAGAAACGAAAGCTGATCATGTGAATGTTGGTAAGAAGAGGGTAAGAGGTGGTGCACTCATGGAAGGTTCAAGGTGCAGTCGTGTGAATGGGAGAGGATGGAGATGTTGTCAACAAACACTGGTTGGTTATTCACTTTGTGAGCATCACTTAGGGAAAGGAAGGTTGAGAAGCATGACAAGTGTAAGAAGCAGGTCTATTGCTACACCAAAGAATAATAACAACATGCAAGAACAAACACTATCTGAATTACCTTCATCTTCTACTACTTCTCTACCTGAAAAGCAAACCAAGTGTATCATTCATCTGAATGATGGTGAAGACAATGATGAGAAGAAGCCAGTGATGGTTACAAAGAAGAGGATGAAGCTTGGAATGGTGAAAGCAAGATCAATAAGCAGCTTGCTGGGACAAACCAACAACACTACTGAAATTGCTCTAGTTGCTGAGAAAGAATAA 1059 0.4391 MRIRKRQVPFPLLPVTLSDPNLINRSPVLVQLNDASTTSPKPSCTHASATAPLSFLDPPQPSDQPLPPIGKPTNGPDDSFAHRRQDKKQGCLVEGEGQKGNDTRKGSILSSEMPSEVISPSSSPLNSKQDGRWCEGEKAFPFKKRRGSFENVAIEDSISINNDNGNKKKMKTKRRLKTKMNKKCLGQDDSNNELDEEVVMRETKADHVNVGKKRVRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRSRSIATPKNNNNMQEQTLSELPSSSTTSLPEKQTKCIIHLNDGEDNDEKKPVMVTKKRMKLGMVKARSISSLLGQTNNTTEIALVAEKE. 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04966 352 MobiDBLite consensus disorder prediction 34 132 - -
Seca8g04966 352 ProSiteProfiles WRC domain profile. 220 264 IPR014977 -
Seca8g04966 352 MobiDBLite consensus disorder prediction 103 129 - -
Seca8g04966 352 MobiDBLite consensus disorder prediction 268 294 - -
Seca8g04966 352 MobiDBLite consensus disorder prediction 77 101 - -
Seca8g04966 352 Pfam WRC 222 262 IPR014977 -
Seca8g04966 352 MobiDBLite consensus disorder prediction 34 50 - -
Seca8g04966 352 MobiDBLite consensus disorder prediction 58 72 - -
Seca8g04966 352 PANTHER EXPRESSED PROTEIN-RELATED 92 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04966 Seca-Chr8 137794429 137797178 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04966 221 291 GRF Transcription Factor Family AT5G53660 30.986 9.07e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04966 - - gmx:102665471 380.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g04966 8 137794429 137797178 Seca8g04966 8 137794429 137797178 ECH
Seca8g04966 8 137794429 137797178 Seca2g04139 2 124790882 124792964 PCT