Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04961 ATGGTGTTAATCTTTCAAGTGGCATTGATGTTATTGCAACCGTTCAGTTTGATGCCAAAGAAGGAAAAATGTCTATTTTTGTTTCTACAACAGCAATGCTTACAGTGGATATTGATCTCTCTAAACTGCTTCCAGAAGATGTTTATGTGGGATTTTCAGCTTCCACAGGGGTCATGGTATTTCTCAAGCTGGGAGTATATTGAGAAGGATCCACTCAATCTAATATGGTTATGGATATTGATTCCTATAATTGTGGTTGGAGGGGCATGTGGGCTTGGTGGTTTATATTACTGGAAAAGAATCCACAAAAAGGAACAAGGGCAAGAGGAGGATTTGCAGATAGAGCTTGAAATTAAAAGTTCATCTAATGCTCCACATAAATTTCACTTGAAGGAGCTTCTATCTGCCACCAAGAATTTCAACTCATCAAACAAGCTTGGGAAAGGAGGATTTGGGACAGTTTATAAAGGCACCTTAAATGGCAAGGATGTTGCTGTGAAAAGGATTTCAAAGGATTCAAGTCATGGGAAGCAAGATTTTATAGCTGAAATCACAACCATAGGCAATCTCAATCACAAAAATCTAGTGAAATTAATAGGATGGTGCTATGAAAAGGGTGAGTTACTACTTGTGTATGAGTTCATGCCAAATGGAAGCTTAGACAGATTCATTTTCTCTGGAGGAACCACAACATCTACAGGGGATTCAACTCTGAGTTGGGAAAGGAGGCTAAGTGTTATATGTGGAGTATCTAGAGCACTTGATTATCTTCACAATGGTTGTGATAAAAGAGTGCTACATAGAGACATAAAACCCAGCAATGTAATGTTGGATTCAGATTTCAATGCTAGACTTGGGGATTTTGGCTTAGCTAGAACCATTCATCTTAGTGAAAAAACTCACCACTCAACAAGAGAAATTGCTGGAACACCAGGATATATAGCACCAGAAAGCTTCCACACTCGAAGGGCTTCTGTTGAAACTGATGTTTATGCATTTGGTGTTCTGATGCTAGAAGTTGTCTGTGGAAGAAGAAAGCTTGAACACAAACAGTATCTAAATAATTATAATAATAGCATTATGGATTGGGTTTGGGAGCTTCATAGTGAAGAAAGCATAACTGATGCTGTAGATTTGAGACTGAATGGTGATTTTAATAAGGCTCAAGCTAGGTGTGTGCTTGAGTTGGGGTTAGCTTGTTGCCATCCCAACCCATATGAGAGGCCATCCATGAGAACTGTCATGCAGGTGCTACAAGGGGAAACAGCTCCACCATTTGTACCTGTTGAGAAACCTGCTTTTACATGGCCAGCAATAGCTCCTGTTCTCAAAGAAGAGTTAAATTCTAATACTACTGGATCAGAAAATAATATGCACTTGTCTTGGCTAGTACAATATCAATTCTTAGCAGTCATCTTCAGTATCATAGCCTATACAGAAGTTGGCTGCTTTTACTTCAATTTCCCTACCTTCCAACCACATGATGAAGCAAATTTGTTGCTAAGCAAAAACTCAAAAATATACTTAAATGCCATCCAAATAACCCCTGATATTCGTGGTGAGATAAAGAATTATTCAGGACGTGCTTTTTACAAAAAGCCATACAGACTTTGGAAGAATGACAAAATTGCTTCCTTCAACACCACTTTTGTGCTCAACATCAGCCCCCAAACATCCCCTGGTGGAGAAGGTTTAGCCTTTATCTTAACTGCAGATCCCACTCTCCCAGAAAACAGTGCAGGAGAATGGCTAGGAATTGTGAATGCTACTACCAATGGAACTTCTCAAGCTGGAATTCTAGCAGTGGAGTTTGACACAAGAAAAAGTTCCACAGAAGATGGCCCTAACAACCATGTTGGCATCAACATAAATAGCATCTACTCTTTCAAACAGGTACCATTAATAAACACTAGGGTCAATATTTCATCAGGTATAAATGTAACTGTGAGAATTCAGTATGTCAATGATACTATATCTGTTTTTGGTTCCATGAGTGGAACTTCAGAGATGGAGACCCTTTTGGTATCTCCACCTCTTAATCTATCTTCCTATCTTCAAGAAAAGGTTTATCTTGGTTTCTCTGCTTCAACAAGCAATTTCACTGAGCTGAACTGTGTAAGAGCATGGGAATTCAATGGTGTAGATATTGCAGATGGTAATAAAAATCTGTTATGGGTTTGGATCATGGTGCCAGCAGTGATTATCATTGGTGGGTTGGTACTATTTTTCTTGCTTTGGCAAAGGAAAAGAAACATGGAGAAGCCAGAAGATGCATATCCAAGGATAGAGGATCAGATTCAACACTCCTCTATGGCTCCAAAGAAGTTTCAACTAAGGGAAATTAAAAAAGCAACAGGTGGATTCAGCCCTCAAAACAAGCTTGGTGAAGGTGGATTTGGAACTGTCTATAAGGGTCTCCTAGGAAACAAGGAGGTAGCAGTGAAGAGAGTCTCCAAGAACTCACGTCAAGGGAAGCAAGAATTCATAGCTGAAGTGACAACAATTGGAAGCCTTCACCATAGAAACTTGGTGAAACTGATAGGATGGTGCTATGAGAACAGAGAACTCCTCCTTGTGTATGAGTTCATGCCAAATGGAAGCCTAGACAAGTACCTATTTGGTGATAACAAAGTTGGTAATGGCCTTGGAATGGGTTATTCAACACTGAATTGGGAAACTAGACATAGTGTGATTCATGGGGTGGCACAAGCATTGGACTATCTTCACAATGGGTGTGAAAAGAGGGTCCTTCACAGAGACATTAAGGCAAGCAACATAATGTTGGACTTAGATTACAATGCTAAATTGGGAGACTTTGGACTTGCTCGTACCATTCAAAAGAGAAATGAAACTCACCACTCCACAAAGGAAATTGCAGGAACACCAGGTTACATGGCTCCAGAGACCTTTCTCACAGGAAGGGCAACAGTGGAAACTGATGTGTATGCATTTGGTGTTCTTGTGTTGGAGGTTGTGTGTGGAAAGAGGCCAGGGAATATGTATGTACAAGATGATTATAAGAACAGTCTTGTGTATTGGGTTTGGGAGCTTTATGGAAAGGGTAGAATAGTTGGTGCTATGGATGTAAAGATGAGTAAGGAGGAGGAGATTAAGGAGGAAGAAGTGGAAAGTGTGCTTGTTCTTGGGTTGGCTTGTTGCCATCCTAACCCACACCAGAGACCATCTATGAGAACTGTTCTGCAGGTTCTGAATGGGGAAGCATCTCCACCAATGGTTCCAAAGGAAAGACCTGCTTTTGTGTGGCCTGCAATGCCCCCATCATTCAAAGAAGATGAAGATAGCTCTCTTGTCCAGGGATCTCTCACTCCAATATTCACTGATATCACTGGCAGATAG 3357 0.4045 MVLIFQVALMLLQPFSLMPKKEKCLFLFLQQQCLQWILISLNCFQKMFMWDFQLPQGSWYFSSWEYIEKDPLNLIWLWILIPIIVVGGACGLGGLYYWKRIHKKEQGQEEDLQIELEIKSSSNAPHKFHLKELLSATKNFNSSNKLGKGGFGTVYKGTLNGKDVAVKRISKDSSHGKQDFIAEITTIGNLNHKNLVKLIGWCYEKGELLLVYEFMPNGSLDRFIFSGGTTTSTGDSTLSWERRLSVICGVSRALDYLHNGCDKRVLHRDIKPSNVMLDSDFNARLGDFGLARTIHLSEKTHHSTREIAGTPGYIAPESFHTRRASVETDVYAFGVLMLEVVCGRRKLEHKQYLNNYNNSIMDWVWELHSEESITDAVDLRLNGDFNKAQARCVLELGLACCHPNPYERPSMRTVMQVLQGETAPPFVPVEKPAFTWPAIAPVLKEELNSNTTGSENNMHLSWLVQYQFLAVIFSIIAYTEVGCFYFNFPTFQPHDEANLLLSKNSKIYLNAIQITPDIRGEIKNYSGRAFYKKPYRLWKNDKIASFNTTFVLNISPQTSPGGEGLAFILTADPTLPENSAGEWLGIVNATTNGTSQAGILAVEFDTRKSSTEDGPNNHVGININSIYSFKQVPLINTRVNISSGINVTVRIQYVNDTISVFGSMSGTSEMETLLVSPPLNLSSYLQEKVYLGFSASTSNFTELNCVRAWEFNGVDIADGNKNLLWVWIMVPAVIIIGGLVLFFLLWQRKRNMEKPEDAYPRIEDQIQHSSMAPKKFQLREIKKATGGFSPQNKLGEGGFGTVYKGLLGNKEVAVKRVSKNSRQGKQEFIAEVTTIGSLHHRNLVKLIGWCYENRELLLVYEFMPNGSLDKYLFGDNKVGNGLGMGYSTLNWETRHSVIHGVAQALDYLHNGCEKRVLHRDIKASNIMLDLDYNAKLGDFGLARTIQKRNETHHSTKEIAGTPGYMAPETFLTGRATVETDVYAFGVLVLEVVCGKRPGNMYVQDDYKNSLVYWVWELYGKGRIVGAMDVKMSKEEEIKEEEVESVLVLGLACCHPNPHQRPSMRTVLQVLNGEASPPMVPKERPAFVWPAMPPSFKEDEDSSLVQGSLTPIFTDITGR. 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04961 1118 CDD lectin_legume_LecRK_Arcelin_ConA 484 712 IPR001220 GO:0030246
Seca8g04961 1118 ProSiteProfiles Protein kinase domain profile. 140 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g04961 1118 ProSitePatterns Protein kinases ATP-binding region signature. 146 167 IPR017441 GO:0005524
Seca8g04961 1118 SMART serkin_6 788 1070 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g04961 1118 SMART serkin_6 140 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g04961 1118 FunFam probable L-type lectin-domain containing receptor kinase S.5 863 1076 - -
Seca8g04961 1118 PANTHER - 513 1080 - -
Seca8g04961 1118 ProSitePatterns Serine/Threonine protein kinases active-site signature. 916 928 IPR008271 GO:0004672|GO:0006468
Seca8g04961 1118 Gene3D Transferase(Phosphotransferase) domain 1 863 1076 - -
Seca8g04961 1118 Gene3D Transferase(Phosphotransferase) domain 1 215 424 - -
Seca8g04961 1118 ProSitePatterns Legume lectins alpha-chain signature. 685 694 IPR000985 -
Seca8g04961 1118 Pfam Protein kinase domain 791 1068 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g04961 1118 Pfam Protein kinase domain 141 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g04961 1118 FunFam Probable L-type lectin-domain containing receptor kinase S.5 773 862 - -
Seca8g04961 1118 ProSiteProfiles Protein kinase domain profile. 788 1079 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g04961 1118 FunFam Probable L-type lectin-domain containing receptor kinase S.5 483 720 - -
Seca8g04961 1118 CDD STKc_IRAK 794 1072 - -
Seca8g04961 1118 SUPERFAMILY Protein kinase-like (PK-like) 769 1070 IPR011009 -
Seca8g04961 1118 SUPERFAMILY Concanavalin A-like lectins/glucanases 483 713 IPR013320 -
Seca8g04961 1118 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672|GO:0006468
Seca8g04961 1118 Pfam Legume lectin domain 486 718 IPR001220 GO:0030246
Seca8g04961 1118 FunFam probable L-type lectin-domain containing receptor kinase S.5 215 424 - -
Seca8g04961 1118 SUPERFAMILY Protein kinase-like (PK-like) 121 418 IPR011009 -
Seca8g04961 1118 ProSitePatterns Protein kinases ATP-binding region signature. 794 815 IPR017441 GO:0005524
Seca8g04961 1118 CDD STKc_IRAK 146 420 - -
Seca8g04961 1118 Gene3D Phosphorylase Kinase; domain 1 124 214 - -
Seca8g04961 1118 Gene3D Phosphorylase Kinase; domain 1 773 862 - -
Seca8g04961 1118 Gene3D - 483 721 - -
Seca8g04961 1118 FunFam Probable L-type lectin-domain containing receptor kinase S.5 125 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04961 Seca-Chr8 137693866 137703602 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04961 79 430 Receptor kinase-like Gene Family AT4G02410 40.845 1.19e-77 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Seca8g04961 Pkinase 1.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04961 - - mcha:111024852 1093.18