Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04915 ATGGCTGACTATCAAGAATACATCCAACTTTTCTTCGTTTGGCTACTCTCCACCATTGTGGTTCGAGCCATACTCACCCAAAAGCATAACAAGGATCATCATCGTCCACCAAGCCCTCCATCTCTACCTATCATTGGACACCTTCACCTTATTTCTGAATTACCTCATCAAAGTTTTCACAAGCTCTCAACTCGCTATGGCCCCATCATGCAACTTTTCCTAGGCTCTGTACCTTGCATCGTAGCTTCCTCTCCTGAAGTCGCCAAGGAGTTTCTCAAAACCCATGAAATATTCTTCTCCAACCGCGTTAGAAGCCCTGCAGTTCATTACTTATCATATGGATCCAAGGGCTTCTTGTTTGCGCCTTATGGAGAATATTGGAAGTTCATGAAGAAGCTCTGCATGTCTAAGCTTCTTGGTGGCAGAACCCTCAATCAGCTCCTTCCGTTGAGGCAACAAGAGACTCTAAGGTTTCTTAAACTTCTTCAAAAGAAAGGGGAAGCATGTGAAGCTGTTGATGTTGGGGGCGAGCTATTGACTCTAATCAATAGTATTATAACAAGAATGACCATGAGCAGAAGGTGTTCTGAAAATGATAGTGATGTGGAAGACATTAGGAGGATGGTGAAAGACACTGCAGAGCTCGTAGGGAAGTTTAATGTGTCTGACTTCTTTCGGTTTGGTAACAATTTTGATTTGCAGGGACGGAACAAAAGGCTTAAAGGGATTCGAGACAAGTTTGATACCCTGATGGAGAAAGTGATAGAGGAGCATGAAGTGGAAAGGGGTGAAGGTGCTCAAATTAAGGATGTACTTGATATTTTGTTGGAAATACAGGAAGATGAGAGCGGTGAGATAAAATTGACCAGAGAATATATCAAGGCTTTCATCATGGACATATTTATGGCTGGAACCGACACATCTGCTATAACCATCGAATGGGCTTTGGCTGAGTTAATCAACCATCCCCATGTCATGGAGAAAGCAAGACAAGAGATTGATTCAGTAACAGAAAAAAGCAGATTAATACAAGAGTCAGACCTTCCTACCCTGCCTTACTTACAAGCTATAGTTAAAGAATCATTAAGAATTCACCCCACAACGCCACTTATAGGGAGAAAATCATTTGAAAGCCGTAACGTTTGTGGTTATGAGATTCCAGCAAAGTCCTCGTTATTTGTTAACTTGTGGTCAATGGGCAGGGACCCCAACCTGTGGGAGGACCCACTTGAATTCATTCCAGAGAGGTTTATGAGTGAAGATAATCAGGTAGATGTGAGGGGACAACATTTCCAGCTAATGCCATTTGGGACAGGTAGAAGAGTGTGTCCTGGTGCCTCACTAGCACTTTTGGTTGTACCCACTATCCTTGCAGCCATGATTCAATGTTTCGAATGGAAGGTTGGTGGAGCTGATAATGGGACCGTTAACATGGAAGAGAAACCAGCAATTTCCCTTCCAAGGGCTCATCCTTTGATTTGTGTTCCTGTTGCTCGCTTCAATCACTTTGCATTCTAG 1518 0.4308 MADYQEYIQLFFVWLLSTIVVRAILTQKHNKDHHRPPSPPSLPIIGHLHLISELPHQSFHKLSTRYGPIMQLFLGSVPCIVASSPEVAKEFLKTHEIFFSNRVRSPAVHYLSYGSKGFLFAPYGEYWKFMKKLCMSKLLGGRTLNQLLPLRQQETLRFLKLLQKKGEACEAVDVGGELLTLINSIITRMTMSRRCSENDSDVEDIRRMVKDTAELVGKFNVSDFFRFGNNFDLQGRNKRLKGIRDKFDTLMEKVIEEHEVERGEGAQIKDVLDILLEIQEDESGEIKLTREYIKAFIMDIFMAGTDTSAITIEWALAELINHPHVMEKARQEIDSVTEKSRLIQESDLPTLPYLQAIVKESLRIHPTTPLIGRKSFESRNVCGYEIPAKSSLFVNLWSMGRDPNLWEDPLEFIPERFMSEDNQVDVRGQHFQLMPFGTGRRVCPGASLALLVVPTILAAMIQCFEWKVGGADNGTVNMEEKPAISLPRAHPLICVPVARFNHFAF. 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04915 505 Gene3D Cytochrome P450 20 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g04915 505 FunFam Cytochrome P450 family protein 27 494 - -
Seca8g04915 505 Coils Coil 326 346 - -
Seca8g04915 505 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g04915 505 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g04915 505 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g04915 505 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g04915 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Seca8g04915 505 CDD CYP93 67 496 - -
Seca8g04915 505 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g04915 505 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g04915 505 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g04915 505 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g04915 505 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g04915 505 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g04915 505 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g04915 505 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g04915 505 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g04915 505 SUPERFAMILY Cytochrome P450 36 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g04915 505 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 11 492 - -
Seca8g04915 505 Pfam Cytochrome P450 36 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04915 Seca-Chr8 136272437 136275155 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04915 1 499 Cytochrome P450 AT5G06900 49.102 1.26e-170 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04915 K24188 - gmx:100805931 721.465