Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04912 ATGAGCACTACACTTTGTCTCACCACCAACCGCTGCGCCATTGTTGCAATCTTCATCCCTTCATTTGCGGAGCGGTTAGGGTGGAGAATTCAGAAGCATGATGAAGCTGCGGTGAAGCAATTCTGTGCGGAAACTTGTGTGAAGAGACATGTTCTTAAGGTTTGGATGCATAATAACAAGCACACTCTTGGTAAGAAACCCTAA 204 0.4559 MSTTLCLTTNRCAIVAIFIPSFAERLGWRIQKHDEAAVKQFCAETCVKRHVLKVWMHNNKHTLGKKP. 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04912 67 NCBIfam homeobox domain, ZF-HD class 21 61 IPR006455 -
Seca8g04912 67 SUPERFAMILY Homeodomain-like 20 65 IPR009057 -
Seca8g04912 67 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 21 63 - -
Seca8g04912 67 Gene3D - 19 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04912 Seca-Chr8 136108790 136108993 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04912 21 63 ZF-HD Transcription Factor Family AT4G24660 76.744 5.86e-21 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04912 - - nnu:104608618 100.523