Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04911 ATGGCTGATTTTGGTGACTATTTTGGGGCACTTGTTATTTGGCTAGCCTCAATCTTCTTGTTACAATTGATCTTCACCAAGTCTCGCATCAAAGCACGCCTTCCACCAAGTCCTCGTGCCTTGCCCGTTCTTGGACACCTCTACCTTCTCTCCAAGCTCCCTCACCAAGCATTTCACAAGATCTCATCCCGTTATGGCCCTTTGGTTTACCTCTTGTTTGGTTCCAAATCTTGTGTTCTTGTTTCCTCCCCTGAAATGGCAAAACAATGCCTCAAAACCCATGAAACTTGTTTCTTAAACCGACCCAAGAGAACCAATGTGGACTACATCACATATGGTTCAGCAGATTTTGTCTTGGCACCTTATGGACCTTATTGGAGGTTCATGAAAAAGCTTTGCATGACTGAACTCCTTGGAGGTCACATTCTTCATCAGCACCTTCCTATTAGAGCTGAAGAAACAAAGCTGTTCTTGAAAGGTATGATGAAAAAGGCTGATTTGAGAGAAGAGGTGAATGTAGGAAAGGAGCTATCCCTGCTTTCAAATAACATAATCACAAGGATGGCTTTGAGGAGAAGGTGTTCTGATGTTGAAGGTGAAGGGCACCAATTGATTGAGCTAGTGAAAGAGATGACTGAGCTAGGTGGGAAGTTCAACTTGGGAGATATGTTGTGGTTTGTTAAGAAGTTGGATTTGCAAGGGTTTGGGAAAAAGCTAGAGAGTGTTAGAAGTAGGTATGATGCTATAATGGAGAGGATCATGAAGGAACATGAAGATACAAGGAGGAAGAAAAAGGAAGAGGAAATGAGTGGTAATGGAGATGAATCGGTGAGGGATTTGCTTGATATTTTACTTGATATTTATGCTGATGAAAGTTCAGAGATCAGATTAACCAGAGAAAATATCAAGGCCTTCATTATGAACATGTTTGGTGCTGGAACTGAGACATCAGCCTATACAATAGAATGGGCTTTGGCTGAGCTAATCAACCATCCAGGAGTGATGGAAAAAGCAAGGGAAGAGATTGATTTAGTAGTTGGTAAGAGCAGATTGGTGGAGGAATCAGATATTCCCAATCTGCCTTATGTTCAATCCATAATAAAAGAAACAATGAGGCTTCACCCTACTGGGCCCTTAATAGTGAGACAGTCAACTGAAGGTTGTAATGTCAATGGCTATTACATTCCTGCAAGGACCACTGTGTTTGTTAATGTATGGGCTATTGGTAGGGACCCAAAGTACTGGAAAAACCCACTTGAGTTTCAGCCAGAGAGGTTCCTTAATGAAGAGGGACAGAGCCAATTGGATCTTAAGGGGCAGAATTTTGAACTGTTGTCTTTTGGAGCTGGAAGAAGAAGCTGCCCTGGTGCTTCACTAGCTTTACAGATTATTCCTACTACCCTGGCTGCTATGATTCAGTGTTTTGATTGGAAGGTCAATGGAACTGTGGACATGGAGGAGGGACCTGGAATGGCACTTCCAAGGGCACATCCCCTGCTATGCATCCCTGTGGCTAGGGTCCATCCTTTTTTTACCCCTCTAGCAAGGTCAAAGTTTCGCCTTCCACCTGGTCCATTGGCCTTACCAATCATTGGACACTTCCACTTACTAAGACCACCCCTTCACACATTTTCTCACAAGATCTCAAATCGTTATGGACCCTTAATTCACATCTATCTTGGCTCCACTCCCATGGTTTTTGTTTCCTCTGCAGAAATAGCCAAAGAGATATTCAAAACCCATGAAGCTTCTTTCTCCAACCGACCTGGAAATGTTGCTATTAGATATCTCACTTATGATGCATCTGATTTAGGATTTGCTCCTTATGGAACCTACTGGAAGTTCATGAAGAAACTCTGCATGTCAGAGCTTCTTAATGGAAAGATGCTGGATCAACTCCTTCCCATTAGGCAAGAGGAGATAAACAGGTTTTTGCAAATGATGCAAAAGAAAGCTGAAGCATTTGAGGCTGTCAATGTTGCAGATGAGCTTTTGAAGCTAACAAACAGCATAGTAATGAGAATGGCAATAAGCAAAAGCTGTTTCAACACTGATGATGAAGCTCACAAGGTGACAGAAAGGATTAAGGAGTCTGCTAAAGTGAGTGGAATGTTTAACCTGGCTGATTATTTTTGGTTCTGTAAGAGATTGGATCTTCAGGGAATGGGAAAGAAGCTAAAGGAGGTTCGTGATAGGTATGACAACATGATAGAAAGTATCATTCAGGAACATGAAGAGGCAAGGAATAAATCAACCAGAAAGGATGCTGCAAGGGATGTGCTTGATGCTCTTTTGAGTATTTATGAAGATCAAAACTCAGAGGTCAAAATAACCAGAGACAACATTAAAGCCTTCTTGGTGGATATGTTCACAGGAGGGACAGATACAACTGCTGTTACTCTTGAATGGTCACTGGCAGAACTAATGAACCACCCAATTGTCATGGAGAAAGCAAGGAAGGAGATTGACTCTGTGATTGGCAAGGACAGAATAGTATTGGAATCTGATATAGCTCATCTTCCTTATCTCCAAGCCATAGTGAAGGAGACTCTGAGGCTTCACCCTCCATCTCCATTTATATTGAGAGAGTCAACTGAGAACTGCACAATAGCTGGATATCACATTCCAGCAAAAACTCAAATTTTCACTAATGTGTGGGCTATTTCCAGGGATCCAAAGAACTGGGATAACCCTCTTGAGTTCATGCCAGAAAGGTTTCTTAACAATGATGAAAATGGAAGGAATAGTCAACTTGAAGTCAGGGGACAACATTATCAGCTTTTGCCTTTTGGCAGTGGAAGAAGACGGTGCCCTGGAACTTCACTAGCACTAAATGTTGCTCATACTACCCTTGCTGCTATGATTCAATGCTTTGAATGGAAGAGTGAAGATGGAAGGAATGGTAGTGTTGACATGAAAGAAGGTCCTTCATTTATTCTTTCAAGAGCTCAACCACTGATTTGTGTACCAAAAACTAGGCTCATGCCATTTCCCTCCATGTCATGCTGA 3009 0.4211 MADFGDYFGALVIWLASIFLLQLIFTKSRIKARLPPSPRALPVLGHLYLLSKLPHQAFHKISSRYGPLVYLLFGSKSCVLVSSPEMAKQCLKTHETCFLNRPKRTNVDYITYGSADFVLAPYGPYWRFMKKLCMTELLGGHILHQHLPIRAEETKLFLKGMMKKADLREEVNVGKELSLLSNNIITRMALRRRCSDVEGEGHQLIELVKEMTELGGKFNLGDMLWFVKKLDLQGFGKKLESVRSRYDAIMERIMKEHEDTRRKKKEEEMSGNGDESVRDLLDILLDIYADESSEIRLTRENIKAFIMNMFGAGTETSAYTIEWALAELINHPGVMEKAREEIDLVVGKSRLVEESDIPNLPYVQSIIKETMRLHPTGPLIVRQSTEGCNVNGYYIPARTTVFVNVWAIGRDPKYWKNPLEFQPERFLNEEGQSQLDLKGQNFELLSFGAGRRSCPGASLALQIIPTTLAAMIQCFDWKVNGTVDMEEGPGMALPRAHPLLCIPVARVHPFFTPLARSKFRLPPGPLALPIIGHFHLLRPPLHTFSHKISNRYGPLIHIYLGSTPMVFVSSAEIAKEIFKTHEASFSNRPGNVAIRYLTYDASDLGFAPYGTYWKFMKKLCMSELLNGKMLDQLLPIRQEEINRFLQMMQKKAEAFEAVNVADELLKLTNSIVMRMAISKSCFNTDDEAHKVTERIKESAKVSGMFNLADYFWFCKRLDLQGMGKKLKEVRDRYDNMIESIIQEHEEARNKSTRKDAARDVLDALLSIYEDQNSEVKITRDNIKAFLVDMFTGGTDTTAVTLEWSLAELMNHPIVMEKARKEIDSVIGKDRIVLESDIAHLPYLQAIVKETLRLHPPSPFILRESTENCTIAGYHIPAKTQIFTNVWAISRDPKNWDNPLEFMPERFLNNDENGRNSQLEVRGQHYQLLPFGSGRRRCPGTSLALNVAHTTLAAMIQCFEWKSEDGRNGSVDMKEGPSFILSRAQPLICVPKTRLMPFPSMSC. 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04911 1002 Coils Coil 250 270 - -
Seca8g04911 1002 PRINTS P450 superfamily signature 928 937 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g04911 1002 PRINTS P450 superfamily signature 845 856 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g04911 1002 PRINTS P450 superfamily signature 792 809 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g04911 1002 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Seca8g04911 1002 PRINTS E-class P450 group I signature 549 568 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g04911 1002 PRINTS E-class P450 group I signature 884 908 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g04911 1002 PRINTS E-class P450 group I signature 781 798 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g04911 1002 PRINTS E-class P450 group I signature 937 960 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g04911 1002 PRINTS E-class P450 group I signature 801 827 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g04911 1002 PRINTS E-class P450 group I signature 844 862 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g04911 1002 PRINTS E-class P450 group I signature 927 937 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g04911 1002 PRINTS E-class P450 group I signature 573 594 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g04911 1002 PANTHER CYTOCHROME P450 98A9 512 994 - -
Seca8g04911 1002 SUPERFAMILY Cytochrome P450 35 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g04911 1002 CDD CYP93 553 990 - -
Seca8g04911 1002 FunFam Cytochrome P450 family protein 514 988 - -
Seca8g04911 1002 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 930 939 IPR017972 GO:0005506|GO:0016705
Seca8g04911 1002 Gene3D Cytochrome P450 21 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g04911 1002 SUPERFAMILY Cytochrome P450 522 993 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g04911 1002 Pfam Cytochrome P450 35 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g04911 1002 Pfam Cytochrome P450 522 979 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g04911 1002 FunFam Cytochrome P450 family protein 26 501 - -
Seca8g04911 1002 CDD CYP93 66 503 - -
Seca8g04911 1002 Gene3D Cytochrome P450 514 991 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g04911 1002 Coils Coil 730 750 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04911 Seca-Chr8 136079231 136089532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04911 499 993 Cytochrome P450 AT5G06900 47.485 5.00e-166 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04911 K24188 - gmx:100807524 865.144