Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04897 ATGGGTAAGAAGAAGAGAGTTAGGGTTTCCGATGATGAGGAACAAGTCGATTCTGATCCCAACCCTTCCAATCACAACGAAAACTCCCTCTACCAGGTTCTTGGTGTGGAGAGGACGGCCTCTCAACAGGAAATAAAGAAGGCATACTACAAGTTGGCATTGAGGCTGCATCCTGATAAGAACCCTGGTGACGAGGAAGCTAAGACAAAGTTCCAGCAATTGCAACATGTTATCTCAATTCTTGGGGATGAAGAAAAACGGGCCATTTATGATCAAACTGGTTGTGTTGATGATGCTGACCTTGCAGGAGATGTTGTCCAGAATCTTAAAGAATATTTCAGAACAATGTACAAGAAGGTCACTGAAGCTGATATTGAAGAGTTTGAAGCAAACTATAGGGGATCTGACTCTGAGAAAAATGATTTGATAGATCTTTACAAGAAGTGCAAGGGTAATATGAACAGGCTGTTCTGTTCAATGCTTTGTTCGGATCCTAAACTTGACTCACACCGATTCAAGGATATTCTTGATGAGGCTATAGCTGCTGGAGAGCTGAAGGAAAAAAAGGCCTACAAGAAATGGGCAAAGAAAATATCAGAAACCAAGCCACCAACTAGTCCTTTAAGAAGGAAGGCAAAATCAAATAAGCAATCAGAAACAGATTTGTATGCTATGATATCACAACGACGACATGAGAGGAAAGACCGATTTGATTCTATGTTCTCATCTCTAGTTTCAAAATATGGTGGAAGTCAAATGCCAGAACCCTCTGAAGAGGAATTTGAAGCTGCACAGAAGAAGCTGGAAAGCCGAAGGTCCTCAAAAAAGTCAAAGCGAAAGTAA 843 0.4116 MGKKKRVRVSDDEEQVDSDPNPSNHNENSLYQVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKTKFQQLQHVISILGDEEKRAIYDQTGCVDDADLAGDVVQNLKEYFRTMYKKVTEADIEEFEANYRGSDSEKNDLIDLYKKCKGNMNRLFCSMLCSDPKLDSHRFKDILDEAIAAGELKEKKAYKKWAKKISETKPPTSPLRRKAKSNKQSETDLYAMISQRRHERKDRFDSMFSSLVSKYGGSQMPEPSEEEFEAAQKKLESRRSSKKSKRK. 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04897 280 CDD DnaJ 31 83 IPR001623 -
Seca8g04897 280 MobiDBLite consensus disorder prediction 1 20 - -
Seca8g04897 280 Gene3D DnaJ domain 15 124 IPR036869 -
Seca8g04897 280 MobiDBLite consensus disorder prediction 1 29 - -
Seca8g04897 280 PRINTS DnaJ domain signature 66 86 IPR001623 -
Seca8g04897 280 PRINTS DnaJ domain signature 49 64 IPR001623 -
Seca8g04897 280 PRINTS DnaJ domain signature 86 105 IPR001623 -
Seca8g04897 280 PRINTS DnaJ domain signature 31 49 IPR001623 -
Seca8g04897 280 Pfam DnaJ domain 30 91 IPR001623 -
Seca8g04897 280 SUPERFAMILY Chaperone J-domain 27 101 IPR036869 -
Seca8g04897 280 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 20 280 IPR042977 -
Seca8g04897 280 ProSiteProfiles dnaJ domain profile. 29 94 IPR001623 -
Seca8g04897 280 MobiDBLite consensus disorder prediction 196 217 - -
Seca8g04897 280 MobiDBLite consensus disorder prediction 247 280 - -
Seca8g04897 280 SMART dnaj_3 28 86 IPR001623 -
Seca8g04897 280 MobiDBLite consensus disorder prediction 196 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04897 Seca-Chr8 135683515 135686127 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04897 31 91 C2H2 Transcription Factor Family AT1G74250 40.909 2.71e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04897 K09529 - gmx:100781463 470.7