Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04871 ATGCTTGAACAGGGGTTTTGTCTCCTTAGATCACCATTCTTGCTTTGTATCTTGATTGGCTTCTTGCTACATTCTGCTGTGATAGCTGAGATTCCATTGGGTTCCAAACTTACTGTGGTTGACAATGATTATTGGGTTTCCTCCAATGGTGATTTTGTATTTGGATTCTTTAACATTTCAGATCAACCTAACCAGTTTAGTGTTGGCATTCGTTTCAATTCTAAATCCATACCATATAGCCATCAAACTGTGGTCTGGGTTGCTGGTGCTCATGTCACAGTAGGTAACATGTCCTATTTTGAACTCACCCAGCAAGGTGAACTAGTCCTGTTTGATTCCTTACAAGATGTATCTGTTTGGAGCACTAGAACAGGAAACAATTCTGTTGTTTCAGCTTCTCTACTTGACAATGGAAATCTTGTTCTAATGGACAGAAAGAAAAACATCATTTGGCAAAGTTTTGACACTCCTTCTGATACACTTCTCCCAGGACAGAGTTTATCTGTTAATTATATGCTTCGAGCTGCAACCATTACCAAGGATCACAAGTCCAGTTACTATAGCCTTCACATGAATGCTTCAGGCCATTTAGAGCTACACTGGGAAAGTAATGTTATCTACTGGACAAGTGAAGGCCCTTCTGCTTCAAATCTCAGTGCTTTTCTTACAACCAGTGGAGCTCTTGAACTTCGAAACCAAAGTTTGAAACCTGTTTGGTCTGTGTTTGGAGATGATCACAATGATTCTGTGAATTACAGATATCTTAGGCTTGATGTGGATGGCAATCTCCGCTTATATTCATGGGATGAAACTTTAGGATCATGGAGATCAGTATGGCAAGCTGTTGAGAATCAATGCAAGGTCTTTGCAACTTGTGGTCAACTTGGTATCTGTGTCTTCAATGCCTCAGGTTCTACTGATTGTAGCTGCCCCTTTGAGGTAACTGGGACTAACAAGTGTTTTGTTCCATATGAACAGGATTGTGAATCTGGCTCCACTATGATTGCATATAAGAACACTTATCTATATGGAATCTACCCTCCTGATAATTCTGTTATCACAAGTAGTTTGGAGCAATGTGAACAGTTGTGCCTGAATGACTCACAATGTACAGTTGCTACCTTTTCCAATAATGGGACTCCACAATGCTCAATAAAGAAAACTGAGTATGTCACTGGTTATGCAGATCCATCTGTAACCTCAATTTCATTTGTTAAGAGATGCTCAGGTCCATTTGCTGTGAATCCCAATCTGCCAAAATCTCCTCCATCCAAACCGCCTCCTAGGCTCTGTGTTCCTTGTCTAGTAGGAGCTGCCACAGGCACATTTTTCATCCTTGTTATTCTCCAGCTGGGAATTGGGTTCTGCATCTACAGAAAAAAAAAGTCTAGTAGGGAAAAAGTCACTTTAGCTTTCACATCCCCAAACTCAAAGGGGGGTTTACTTGTGATGTCCTTTTCAGAAATCAAGAGCCTCACTGGGGATTTCAAGAATCAAATTGGGCCAAAGATGTTCAAAGGTTTGCTACCAAACAATCACCTGATTGCAGTCAAAGACCTGAATGCTTCCATAGAAGAAAGGAAGTTCCGGAGTGCTGTTCTGAAGATGGGTAGCATCCACCACAAGAACCTTCTGAAGCTGGAGGGCTATTGTTGTGAGTTTGATCATAGATTTTTGATGTATGAATATGCCAAAAATGGTTCAGTGGACAAGTACATAGATGATTCTGCTCTTTGCAGGAAGCTAACATGGAGAAAGAAAGTTGAAATATGCTCAAGTGTGGCAAAGGCCATCTGTTATTTGCATTCCGGGTGTAGGGAGTTTATAAGCCATGGAAACTTGAAATGTGAAAATGTTATGTTGAATGAGAACTTAGAGGCTAAGGTGAGTGAATTTGGTTTTGCTAGAGTAGATGGTAAGGCAACATATTGTGGCTTTTCTGCTGAGAAGGATGTAGAGGATTTTGGCAAGTTAGTTTTAACTTTGCTAACCGGGTGTCATGATCATGATCATGTTGAACTTTGTGAGTGGGCATATAAAGAATGGATGGAAGAAAGGGTAGCTAATGTGGTTGATAAAAGAATGGAAGGAGGTTACAATTCAGAGGAATTGGAACGTGCATTAAGGATTGCATTTTGGTGCCTTCAAATGGATGAACGAAGGAGACCTTCAATGGGGGAGGTAGTAAGAGTACTTGATGGTACATTGAATGTTGATCCTCCACCACCTCCATTTGCCTTTCAGAGGTTGTCTTTGCAGGTAGATAGTTCAGAAGAAAATGGTTCAGAATCTGAAGTATAG 2301 0.4063 MLEQGFCLLRSPFLLCILIGFLLHSAVIAEIPLGSKLTVVDNDYWVSSNGDFVFGFFNISDQPNQFSVGIRFNSKSIPYSHQTVVWVAGAHVTVGNMSYFELTQQGELVLFDSLQDVSVWSTRTGNNSVVSASLLDNGNLVLMDRKKNIIWQSFDTPSDTLLPGQSLSVNYMLRAATITKDHKSSYYSLHMNASGHLELHWESNVIYWTSEGPSASNLSAFLTTSGALELRNQSLKPVWSVFGDDHNDSVNYRYLRLDVDGNLRLYSWDETLGSWRSVWQAVENQCKVFATCGQLGICVFNASGSTDCSCPFEVTGTNKCFVPYEQDCESGSTMIAYKNTYLYGIYPPDNSVITSSLEQCEQLCLNDSQCTVATFSNNGTPQCSIKKTEYVTGYADPSVTSISFVKRCSGPFAVNPNLPKSPPSKPPPRLCVPCLVGAATGTFFILVILQLGIGFCIYRKKKSSREKVTLAFTSPNSKGGLLVMSFSEIKSLTGDFKNQIGPKMFKGLLPNNHLIAVKDLNASIEERKFRSAVLKMGSIHHKNLLKLEGYCCEFDHRFLMYEYAKNGSVDKYIDDSALCRKLTWRKKVEICSSVAKAICYLHSGCREFISHGNLKCENVMLNENLEAKVSEFGFARVDGKATYCGFSAEKDVEDFGKLVLTLLTGCHDHDHVELCEWAYKEWMEERVANVVDKRMEGGYNSEELERALRIAFWCLQMDERRRPSMGEVVRVLDGTLNVDPPPPPFAFQRLSLQVDSSEENGSESEV. 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04871 766 ProSiteProfiles PAN/Apple domain profile. 328 408 IPR003609 -
Seca8g04871 766 Gene3D - 157 273 IPR036426 -
Seca8g04871 766 PANTHER OS07G0415500 PROTEIN 11 746 - -
Seca8g04871 766 ProSiteProfiles Bulb-type lectin domain profile. 158 278 IPR001480 -
Seca8g04871 766 Pfam PAN domain 336 408 IPR003609 -
Seca8g04871 766 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 210 IPR036426 -
Seca8g04871 766 ProSiteProfiles Protein kinase domain profile. 443 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g04871 766 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 564 642 - -
Seca8g04871 766 PIRSF SRK 3 766 IPR024171 GO:0004674
Seca8g04871 766 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 458 563 - -
Seca8g04871 766 Pfam Protein tyrosine and serine/threonine kinase 512 638 IPR001245 GO:0004672|GO:0006468
Seca8g04871 766 Gene3D Transferase(Phosphotransferase) domain 1 564 643 - -
Seca8g04871 766 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 27 156 - -
Seca8g04871 766 Gene3D Transferase(Phosphotransferase) domain 1 644 738 - -
Seca8g04871 766 SMART ntp_6 329 407 IPR003609 -
Seca8g04871 766 Pfam D-mannose binding lectin 83 172 IPR001480 -
Seca8g04871 766 Gene3D Phosphorylase Kinase; domain 1 454 563 - -
Seca8g04871 766 SMART blect_4 36 157 IPR001480 -
Seca8g04871 766 SUPERFAMILY alpha-D-mannose-specific plant lectins 185 277 IPR036426 -
Seca8g04871 766 Gene3D Hepatocyte Growth Factor 332 409 - -
Seca8g04871 766 SUPERFAMILY Protein kinase-like (PK-like) 503 732 IPR011009 -
Seca8g04871 766 Gene3D - 29 156 IPR036426 -
Seca8g04871 766 Pfam S-locus glycoprotein domain 247 310 IPR000858 GO:0048544
Seca8g04871 766 CDD B_lectin 46 157 IPR001480 -
Seca8g04871 766 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 157 277 - -
Seca8g04871 766 ProSiteProfiles Bulb-type lectin domain profile. 30 155 IPR001480 -
Seca8g04871 766 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 643 740 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04871 Seca-Chr8 135119211 135121511 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04871 447 748 Receptor kinase-like Gene Family AT3G45860 29.480 4.39e-39 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Seca8g04871 PK_Tyr_Ser-Thr 2.6e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04871 - - gmx:100815678 1307.74