Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04848 ATGGTATTTAGTTCAGAGGATGAGGTGAGATCGTATTATACAAAATATGCCAACCAAGAAGGTTTTGGCATCATGACAAGAACGTCAAAAAAGGGAGCTGATGGAAAGGTTGGATATTTTATATTGGCATGTTCCAGAGAAGGAAATAGAAGAACCAGTAAAAAGAATCCCATCAGAAATTGTCCATCAAGGAAACAGAAGTGTGAAGCCAGGATCATTGTATATTTATGTAAAGATGGAGCCTACCAAATTAAAACAGTCACACTTAATCACAATCATGAATTGAATCCAGGTCAAGTCAAGTCTAGAAATAATGTTGATATTAACATGGGGTTGAAAAGGACATTAGATCCAAATGATCAAGCTGAGAAGCGACTGAAGAAGAGTTTTGGGTGTCTTGTGGTTGAAGATGAGGCCTATGAAAATTTGGCATTTTTTGAACATGGTTTTGGAAACTACATTGAGAAAGAAAAACGACTTACTGGGAAGGATGGAGATGGTTATGCCCTTTATAAGTATTTTATGCGGATGCAAGAACAAGATAGCAATTTCTTTTATGTAATTGACTTTGATGATTGCTTCTGTGCAAAGAATGTTTTCTGGGCTGATGGAAGGAGTAGAGCTGCATATAAATCATTTGGTGATGTGGTGACGTTTGTTTGGTTGTTTCAATCATGGTTAGTTTGCATGTTTGGTGTTCTGCCCAAAGGTATCATAACAGATCAATGCAAGGCCATGCAGAGTGCAATTGGAATTGTTTTCCCCTCCACTCGACATTCTTGGTGTTCGTCACATATTATGAAAAAGCTTCTTCAAAAAATAGGTGGACATGCTGAGTACAAGTCTATAAGTTACCATTTGCAGAATGCTGTATATGATACATTCACTACAAATGAATTCGAAATGGCCTGGAAAAAAATTGTGGAGGAATTTGGCTTAGAGAACAATGAATGGTTGAAGGAGTTGTTCCTTGAAAGACATAGATGGGTTCCTACCTTTGCAAGGTGTAGTTTTTGGGCTGGAATGTCTACTACCTCACGTGGTGAAATCATGCATGTTTTTTTTGATGGATTTATTGATGGCCAAACAACTTTACAACAGTTTCTTGATAAATATGATATTGCATTGCAAGCCAAAGCAGAAAAAGAGTTTGAAGCTGATTTCCGTTCATTCTGTAGCACCCTTGGATGTGCTACGAAATCTCCATTTGAGCGGCAATTCCAATCTGCATACACTCATGCAAAATTTCTAGAGGTTCAGAAAGAATTTGTAGGAAAGGCTGATTGTAATGTTTGTGTTGCCCGTGATGAAGGTTCTATTTGTCACTATAATGTCATTGAAGATGTGATGATGGGGGATAAACCCAAGGAATCCATATTTCAAGTCACATTTGACAGGGTTAACTGTGATGTAAAGTGCATATGCAACATGTTTGAATTTAGAGGTATACTTTGTAGGCATTCACTTGCTATACTCTCCCAGGAGCGAGTAAAGGAGATTCCCTGTAAATATATCTTGGATAGATGGAGGAAAAGTTTAAAGAGGAGGCACGCATATGTAAAGACCAGCTACACTACTAAGCAGCTTCAACCTCAGATGCAAAGGTTTGATTTATTATGCAAGCAATTTGATAGTGTTGCTGAAATTGCTTCTGAATTTGAGGAAACAAGTTCTTTTGTAAAAAGTAACATCTCTGACCTGAAAGAGAAGTTGGAAGCATGGGCAGCTCGTTTGAGAAACTCATCTGAGGTGGCAGTGCCTATAAGCTGTGCAATTGAAAGTACTTGA 1788 0.3792 MVFSSEDEVRSYYTKYANQEGFGIMTRTSKKGADGKVGYFILACSREGNRRTSKKNPIRNCPSRKQKCEARIIVYLCKDGAYQIKTVTLNHNHELNPGQVKSRNNVDINMGLKRTLDPNDQAEKRLKKSFGCLVVEDEAYENLAFFEHGFGNYIEKEKRLTGKDGDGYALYKYFMRMQEQDSNFFYVIDFDDCFCAKNVFWADGRSRAAYKSFGDVVTFVWLFQSWLVCMFGVLPKGIITDQCKAMQSAIGIVFPSTRHSWCSSHIMKKLLQKIGGHAEYKSISYHLQNAVYDTFTTNEFEMAWKKIVEEFGLENNEWLKELFLERHRWVPTFARCSFWAGMSTTSRGEIMHVFFDGFIDGQTTLQQFLDKYDIALQAKAEKEFEADFRSFCSTLGCATKSPFERQFQSAYTHAKFLEVQKEFVGKADCNVCVARDEGSICHYNVIEDVMMGDKPKESIFQVTFDRVNCDVKCICNMFEFRGILCRHSLAILSQERVKEIPCKYILDRWRKSLKRRHAYVKTSYTTKQLQPQMQRFDLLCKQFDSVAEIASEFEETSSFVKSNISDLKEKLEAWAARLRNSSEVAVPISCAIEST. 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04848 595 Pfam MULE transposase domain 217 269 IPR018289 -
Seca8g04848 595 Pfam FAR1 DNA-binding domain 11 97 IPR004330 -
Seca8g04848 595 Coils Coil 564 584 - -
Seca8g04848 595 ProSiteProfiles Zinc finger SWIM-type profile. 460 496 IPR007527 GO:0008270
Seca8g04848 595 Pfam SWIM zinc finger 468 493 IPR007527 GO:0008270
Seca8g04848 595 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 573 IPR031052 GO:0006355
Seca8g04848 595 SMART 26again6 471 498 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04848 Seca-Chr8 134603180 134605063 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca8g04848 FAR1 5.8e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04848 - K17604 gmx:102663358 692.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g04848 8 134603180 134605063 Seca8g04848 8 134603180 134605063 ECH