Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04838 ATGTCATTCAAATCTGTGGAGGAATTCAAAGACTTTTACAAAAAATATGCCTTTCAAAAAGGGTTTGGTTTTGTGATAAGAACCTCAAGAAAGAACTCTTCTGGCTGTGTTTGTAACCTTGTATTAGCATGTGCACGCCAAGGACACAGCAAATCAACCGTGAAGAACTCTTTCAAAAGTGTGTCATCAATCAAAGTTGAATGTGGAGCACATGTTACTGCTTGCTTGAAGTCTGATGGGTTGTATTACATAACCAAGGTCATTCTTCATCATTCTCATGATCTGAGCCCAAACAAAGCAAGATTGTTCAAGTCAAACAAAGAGATGAGCATGCATGTAAGGAGAGTCTTGGATGTCAATGATAGGGCAGAGGTGAGATTGAACAAAAGCTTTAATTCCATTGTGACAGATGTGTGGGGCTATGAAAATTTGCCTTGTATTGAGAGAGAGATGCGAGGAATTATATTATAA 471 0.3822 MSFKSVEEFKDFYKKYAFQKGFGFVIRTSRKNSSGCVCNLVLACARQGHSKSTVKNSFKSVSSIKVECGAHVTACLKSDGLYYITKVILHHSHDLSPNKARLFKSNKEMSMHVRRVLDVNDRAEVRLNKSFNSIVTDVWGYENLPCIEREMRGIIL. 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04838 156 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 140 - -
Seca8g04838 156 Pfam FAR1 DNA-binding domain 11 96 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04838 Seca-Chr8 134360137 134361567 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca8g04838 FAR1 7.6e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04838 - - psat:127130074 152.91