Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04836 ATGTCATTCAAATCTGTGGAGGAATTCAAAGACTTTTACCAAAAATATGCCTTTCAAAAAGGGTTTGGTTTTGTGATAAGAACCTCAAGAAAGAACTCTTCTGGATGTGTTTGTAACCTTGTATTAGCATGTGCACGCCAAGGACATAGCAAATCAACCGTGAAGAACTCTTTCAAAAGTGTGTCATCAATCAAAGCTGAATGTGGAGCACATGTTACTGCTTGCTTGAAGTCTGATGGGTTGTATTACATAACCAAGGTCATTCTTCATCATTCTCATGATCTGAGCCCAAGCAAAGCAAGATTGTTCAAGTCAAACAAAGAGATGAGCATGCATGTAAGGAGAGTCTTGGATGTCAATGATAGGGCAGGGGTGAGATTGAACAAAAGCTTTAATTCCATTGTGACAGATGTGTGGGGCTATGAAAATTTGCCTTGTATTGAGAGAGAGAGAGATGCGAGGAATTATATTATAAAGGAAAGGCAAGCAATTGGCAAAGGGGGTGATGGTGAGGCTCTCAAGTGCTATTTTGCTAGAATGCAAGAGCAAAATAGTGACTTTTTCTATGACATTGATTTGGATAATGATTTTGATATTAGAAATGTGTTTTGGGCAGATGCAAGAAGTAGGGCAGCATATGTGTCATTTGGTGATGTGATTACATTTGATACAACTTATCTTACTAATAAGTATGATATGTCATTTGTTGCACTTACAATGCATTCTCTTGCTGTGCTTGGTATAAAAAGGGTGAAAGAAGTGCCTTCTAAGTATGTTTTATCAAGGTGGAGCAAAAACATGAAAAGAATACACACATATATTAAGAGTAGCTATGATGTTAAACAATTAAAGCCTCAAATGCAAAGATTTGATGATTTATGTAAGAAATTTTATGAAGTTGGTGAAGTTGCTGCAGAATATGAAGACACGACTACTTTTCTACAAGAGTTGTTACATGAAGCAATGAGCAAATTGAAGGTGATGATTGCATCTAATAAACAGAATCAAATATGCATTGATCGTCCTACTTGCAATGTGAATGTAATTTGTGACACGCCAACGGTGAGTGAAACCATTCATAGTCCAAAGGAAGTACGTCGTGTAGGTCGCCCTGCTTCAAAAAGGAAAGTCTCAATACTTGAGAAAGCTATCAAAAGTTCGAAGAACAGAAGGAAGACGATGAAATCCAATCAAATGCAACAGCAAATGGGTGTAAATGTTGGTGAGGAATGCCATGGTCAAATTGTCTCTACAGATGGTAGCTTTGTTTCATTATTGTCAAGCTTCCAAGGGAGTGGAGTTGGAGCTTTAACAAATTACTTTCCTGAGCCATAG 1335 0.3745 MSFKSVEEFKDFYQKYAFQKGFGFVIRTSRKNSSGCVCNLVLACARQGHSKSTVKNSFKSVSSIKAECGAHVTACLKSDGLYYITKVILHHSHDLSPSKARLFKSNKEMSMHVRRVLDVNDRAGVRLNKSFNSIVTDVWGYENLPCIERERDARNYIIKERQAIGKGGDGEALKCYFARMQEQNSDFFYDIDLDNDFDIRNVFWADARSRAAYVSFGDVITFDTTYLTNKYDMSFVALTMHSLAVLGIKRVKEVPSKYVLSRWSKNMKRIHTYIKSSYDVKQLKPQMQRFDDLCKKFYEVGEVAAEYEDTTTFLQELLHEAMSKLKVMIASNKQNQICIDRPTCNVNVICDTPTVSETIHSPKEVRRVGRPASKRKVSILEKAIKSSKNRRKTMKSNQMQQQMGVNVGEECHGQIVSTDGSFVSLLSSFQGSGVGALTNYFPEP. 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04836 444 Pfam FAR1 DNA-binding domain 11 96 IPR004330 -
Seca8g04836 444 PANTHER OS01G0519700 PROTEIN 239 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04836 Seca-Chr8 134353904 134355467 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca8g04836 FAR1 1.6e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04836 - - psat:127087122 285.804