Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04820 ATGGAGACGAAACCGACGGAGATCAGCAGCGCTAAGATGTTCGGAGGTTACAACAAGAGGTACAAACATTTCAGCCCCACCCTCGGCTGCTCCATGAACTTCCACATCTACTTCCCTCCTTCTCCCTCTCCTTCTCACAAATTCCCTGTCCTTTACTGGCTCTCCGGTCTCACTTGCACCGACGAGAATTTCATTTTCAAGTCCGGTGCTCAACGTGCCGCTTCCAGCGAGGGTGTTGCCTTGATTGCCCCTGATACCTCTCCAAGAGGCTTAAATGTGGAAGGAGAAGCGGATAGCTGGGACTTTGGTGTAGAAGATATCTTCATTGTATATTTACATTCTGGAACAGGTGCAGGATTTTATCTCAATGCTACACAAGAGAAATGGAAGAATTGGCGCATGTATGATTATGTTGTCAAGGAATTGCCAAAGCTTCTAAGTGATAACTTTCCAGAGCTTGAAACATCAAAAGCTTCTATATTTGGTCATTCTATGGGTGGGCATGGTGCTTTAACAATCTACCTGAAAAATCAGGATAAATATAAGTCAGTTTCTGCCTTCGCACCAATAGCAAATCCTATAAATTGTGCTTGGGGACAGAAGGCATTCACAAATTATCTCGGTGGCAACAAATCTGACTGGGAGGATTATGATGCTACTTCTTTGGTGACAAAATTTCCCAATGTATCTACCACCATTTTGATTGATCAGGGGGAGGATGACAAATTTTTGCCTGATCAACTGCTGACTCACAAGTTTGAAGAGGCATGCAGGAATTCCAATGTTCCACTGATGTTACGTTTCCAACCTGGTTATGATCACTCTTATTATTTTATTGCCACCTTCGTAGATGATCACATCCGACACCATGCTCAAGCTCTTAGGCTTGTTTAA 894 0.4351 METKPTEISSAKMFGGYNKRYKHFSPTLGCSMNFHIYFPPSPSPSHKFPVLYWLSGLTCTDENFIFKSGAQRAASSEGVALIAPDTSPRGLNVEGEADSWDFGVEDIFIVYLHSGTGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFPELETSKASIFGHSMGGHGALTIYLKNQDKYKSVSAFAPIANPINCAWGQKAFTNYLGGNKSDWEDYDATSLVTKFPNVSTTILIDQGEDDKFLPDQLLTHKFEEACRNSNVPLMLRFQPGYDHSYYFIATFVDDHIRHHAQALRLV. 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04820 297 SUPERFAMILY alpha/beta-Hydrolases 8 294 IPR029058 -
Seca8g04820 297 Gene3D alpha/beta hydrolase 6 297 IPR029058 -
Seca8g04820 297 Pfam Putative esterase 25 288 IPR000801 -
Seca8g04820 297 PANTHER S-FORMYLGLUTATHIONE HYDROLASE 5 295 IPR014186 GO:0018738|GO:0046294
Seca8g04820 297 FunFam S-formylglutathione hydrolase 5 296 - -
Seca8g04820 297 NCBIfam S-formylglutathione hydrolase 8 294 IPR014186 GO:0018738|GO:0046294
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04820 Seca-Chr8 134040062 134045142 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04820 1 296 Carbohydrate Esterase AT2G41530 77.027 1.77e-174 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04820 K01070 - gmx:100796669 538.495