Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04817 ATGCATGATTTGATACAAGAAATGGGTTGGCAAATCGTTCGTGAAGAATCTATGAGAGAGCCTGGAAAACGAAGTCGGTTGTGGGATCCTAAGGAAATATATGAAGTCCTCAAGTATAACAAGGGTACTGACAGTATAGAAAGCATAGTATTGGACACTTCTCAAATCAAAGACGTGACAATAAGCCCTCAAATTTTCCACAGAATGTACAAGCTGAGGCTTTTGAATTTTTATATGCCCTCAAGCGATAAGAGAAGCAACGTACATATTTCTAGAGGCCTTGAAAGTATGCCTGATGAATTAAGTTATCTCCGATGGGACTGCTTTCCGTTGACATCCTTGCCACCATCATTTTGTGCGGAGAAACTTGTTGAACTTGATCTAAAACATAGCCTCATTGAAAGACTTTGGGATGGAAAGCAGGATCTTGTGAATTTGAAGTCATTATACCTTTGTGGTAGCAAGCACCTGATTGAGCTCCCAGATTTCTCTATGGCCTCAAAACTTGAAGAAGTACATCTTGATGATTGTACAAGTTTGTTGAATGTTCCTTCATCCATTTTGTCACTCGATAGCCTTTTTGCTCTAAATTTGAGAGGCTGTAAAAAGCTTCGTTACATTGAAAGTGAGAAGCGATCAAGATCTCTCCGATGGCTTAATCTGAGAGGGTGCTCAAGACTTGTAAAGTATTTATTTTCTTCAGAGAAATTGGAGTACTTGAGCTTAGAAGACACCGCAATTGAAGAACTGCCTTCATCAGTTGGACAACTCAAGGACTTCTCTAGCATTTGTCTTGATCATTGTACATTTGACACCTCATTGTCCATTACCACTCTCTCTCTGGACAATTGTTCAAATTTATCAAAACTCCCTGACAACCTTGGCCTCTTATCAAAGTTAAACAAACTTTCATTAAGTGGAAGCAATATTGAGAACCTGCCTGGTAGCATAAAATATCTTTCTCAATTGAGAGCTCTGAATGTAAGCAACTGCAGGAGGCTTCGTTCCTTGCCAGAGCTCCCATTCTTGTTACAAGACTTGAATGCAAGTAATTGTGTTTCCCTAGAAACAGTATCAAATTTAGGGATCAAGATGTTGCAAGATTCTTTTGGTAGACTGAAGAAGAGCTCATTGCTCAGACAGATTCAAGAGGAAGAAAAAATGTCTCTTCGTAATCGTGGCTATTTGGGAAGATTTGAGTTTCGTAATTGCATAAAGTTGGATCAGATTGCATGCAAGACTGTTATGGAGGAGGCGCTAATTAGAATTCAGCTAGCAGCCTACCTGTCATCAATGATTGATGAATGGCATGATCCTTATTGTCAAACTGATGAAGTTCCTAAGAATTTTGACCCTGATGATCTTGTATATATTTCCCGTCCAGTTTATATTGTTTTGCCGGGAAATGAAGTGCCAAATTGGTTCATTCATAAAAGAACAGACTCCTCAATCACTTTAAAACTTTCTCCACCGTGGCATCGTTGTTGCAATTACCTGGGCTTAGCTTTCTGCCTTGTTCTAGGACCATCCCACTCAAATATGAAGAAAAATCAGCATATTGGTTTTGTGGCAGGGTGTAGATACTATTTTGAAGGCAAATATGCTGGAACTTGCATGATAATGTCTTCTTGTAATGGTGCGAAATCAGATCAGGTATGGCTTTGGTTTGACAGATTGTTAGAAGTGACAGAGGAAACAGACATTCTATTAGGGGAGGTCTCCTTTGAATTTTTTGTAAGGCCTTGCAGTTCTGGACTTGTTGTGAAACAATATGGAATTCGACCATTATATGCTCCGTATGACATCATGCAAAGCTCAAATGAACAAGAAGGTAAGAGACCTTACGCGGAGTTTGAAGGCTATGAAGGCTATGAAGATAAAAGGAACTATGAGCTGGAGTTTGAAGACTATGGAGATAAAAGGAAGTATAAGCTTTACCGCCTATATGCTCATCCTCCTGGAGGCCTTGGATTTCCATCAGAAAAACAAAGTATTTCTGGGTATCACGATGGACATCTTGGGAAATCCTTTCCATCAACTTATTGTGCCAATGATGTTGATGAAATTATACTGCAACATCACCACTTTGGTAATGGAGCTGAAGTACTTGTTTATTGTGGCCTTGTTGGTTGCCACCATCAACGTGATCCGTCTATGCCACGTGCTCTACGCTATTTAGCACATTTGCTTCTGGATGACTATTGCAATTTCGGTAAACTCCTAGACAATCCTGTTTAG 2238 0.3963 MHDLIQEMGWQIVREESMREPGKRSRLWDPKEIYEVLKYNKGTDSIESIVLDTSQIKDVTISPQIFHRMYKLRLLNFYMPSSDKRSNVHISRGLESMPDELSYLRWDCFPLTSLPPSFCAEKLVELDLKHSLIERLWDGKQDLVNLKSLYLCGSKHLIELPDFSMASKLEEVHLDDCTSLLNVPSSILSLDSLFALNLRGCKKLRYIESEKRSRSLRWLNLRGCSRLVKYLFSSEKLEYLSLEDTAIEELPSSVGQLKDFSSICLDHCTFDTSLSITTLSLDNCSNLSKLPDNLGLLSKLNKLSLSGSNIENLPGSIKYLSQLRALNVSNCRRLRSLPELPFLLQDLNASNCVSLETVSNLGIKMLQDSFGRLKKSSLLRQIQEEEKMSLRNRGYLGRFEFRNCIKLDQIACKTVMEEALIRIQLAAYLSSMIDEWHDPYCQTDEVPKNFDPDDLVYISRPVYIVLPGNEVPNWFIHKRTDSSITLKLSPPWHRCCNYLGLAFCLVLGPSHSNMKKNQHIGFVAGCRYYFEGKYAGTCMIMSSCNGAKSDQVWLWFDRLLEVTEETDILLGEVSFEFFVRPCSSGLVVKQYGIRPLYAPYDIMQSSNEQEGKRPYAEFEGYEGYEDKRNYELEFEDYGDKRKYKLYRLYAHPPGGLGFPSEKQSISGYHDGHLGKSFPSTYCANDVDEIILQHHHFGNGAEVLVYCGLVGCHHQRDPSMPRALRYLAHLLLDDYCNFGKLLDNPV. 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04817 745 Gene3D Ribonuclease Inhibitor 37 230 IPR032675 -
Seca8g04817 745 SUPERFAMILY L domain-like 1 360 - -
Seca8g04817 745 Gene3D Ribonuclease Inhibitor 231 393 IPR032675 -
Seca8g04817 745 Pfam C-JID domain 466 598 IPR045344 -
Seca8g04817 745 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 356 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04817 Seca-Chr8 134006420 134010170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04817 1 333 WRKY Transcription Factor Family AT4G12020 37.822 1.05e-50 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04817 - - tpra:123891409 930.628