Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04787 ATGGAAATTGCGAAATCCAAATCTCCACTAGAGTTGTTAAATTGGCATGACATAGAGAAAATGAAATATTCGTGGAATGTAGCGTGTGAAGTAATGAGACTTTCCCCTCCACTTCAAGGAGCTTTTAGGGAAGTCATGAATGACTTTATTTTCAATGGATTCTCAATTCCAAAGGGTTGGAAGGTGTATTGGAGTGCAAGTTCAACACATAGGAATCCAGAGTGTTTTCCAGAGCCAGAGAAATTTGACCCGAGTAGATTCGAAGGAAACAGGCCAGCTCCGTACACTTTCGTACCATTCGGTGGAGGACTGAGGATGTGTCCCGGAAGAGAGTATGAAAAGGTTCAAGTGGGAAAAGGTTATTCCTTATGA 372 0.4194 MEIAKSKSPLELLNWHDIEKMKYSWNVACEVMRLSPPLQGAFREVMNDFIFNGFSIPKGWKVYWSASSTHRNPECFPEPEKFDPSRFEGNRPAPYTFVPFGGGLRMCPGREYEKVQVGKGYSL. 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04787 123 PRINTS B-class P450 signature 26 37 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g04787 123 PRINTS B-class P450 signature 107 118 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g04787 123 PRINTS B-class P450 signature 43 70 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g04787 123 PRINTS B-class P450 signature 71 86 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g04787 123 PRINTS B-class P450 signature 98 107 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g04787 123 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 100 109 IPR017972 GO:0005506|GO:0016705
Seca8g04787 123 Gene3D Cytochrome P450 2 117 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g04787 123 SUPERFAMILY Cytochrome P450 11 112 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g04787 123 PANTHER CYTOCHROME P450 26 1 117 - -
Seca8g04787 123 Pfam Cytochrome P450 13 111 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04787 Seca-Chr8 133348897 133349388 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04787 1 117 Cytochrome P450 AT5G45340 43.590 1.12e-27 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04787 K20667 - pvy:116124678 227.254