Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04773 ATGCATTTCTTTGAGTATACAAGGCTAGATCCTAGGTATAATGAGGTTTTCAACAACGGTATGCTTAGTTCCACCACCATAATTATGAAGACGATACTTGAACTCTACAATGGTTTTGAACATATCAATAGGCTGGTGGATGTTGGTGGTGGTCTTGGGATCAATGTTAAATTGATCACTTCCAAATACCCTCACATAGAGGGTGTTAATTTTGACTTGCCTCATGTCATAAAATACGCCCCCATTTATACCGGAAAATCCATATCTTTATATGATTTCCATTTATTAACTTATATATATACTATTCATATATATGTTTTAGGTGTGGAGCATGTGAGCGGAGATATGTTTGAAAGCGTTCCTAATGGGGATGCCATTTTTATGAAGTGGATACTTCATGATTGGAATGATGAGTGTTGCATAAAGCTCTTGGAGAATTGCTACAAGGCTATTCCTAATGATGGAAAGGTTATTGTTGTTGACACAATTCTTCCGATTGTGCCTGGGACAACATCTACTGACAAGGTTGCCTCTGCAAATGATCTCATTATGTTGACTCAAACCACAGGAGGAAAAGAACGCACGCAACAAGAATTCATGGCATTGGCAATAGGGTCTGGATTTTGCGGCATCAAAGTCGTATGTTGTGTTGCTAGCTTTTGTGTTATGGAGTTTTTCAAGTAG 684 0.3816 MHFFEYTRLDPRYNEVFNNGMLSSTTIIMKTILELYNGFEHINRLVDVGGGLGINVKLITSKYPHIEGVNFDLPHVIKYAPIYTGKSISLYDFHLLTYIYTIHIYVLGVEHVSGDMFESVPNGDAIFMKWILHDWNDECCIKLLENCYKAIPNDGKVIVVDTILPIVPGTTSTDKVASANDLIMLTQTTGGKERTQQEFMALAIGSGFCGIKVVCCVASFCVMEFFK. 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04773 227 PANTHER O-METHYLTRANSFERASE 4 210 IPR016461 GO:0008168
Seca8g04773 227 Gene3D - 3 32 IPR036388 -
Seca8g04773 227 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 227 IPR016461 GO:0008168
Seca8g04773 227 Pfam O-methyltransferase domain 3 83 IPR001077 GO:0008171
Seca8g04773 227 Pfam O-methyltransferase domain 108 208 IPR001077 GO:0008171
Seca8g04773 227 Gene3D Vaccinia Virus protein VP39 14 217 IPR029063 -
Seca8g04773 227 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 225 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04773 Seca-Chr8 133068173 133069496 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04773 1 227 Monolignol Biosynthesis Gene Families AT5G54160 51.982 1.33e-78 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04773 K13066 - gmx:100789402 299.671