Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04754 ATGATGGAAAAGGATTTTTTTAGTGCAGCTCATGTTTGGTGGATGTTTCGAGTATTTGGGCATGACAAAATTTGGGTATTAGATAGTGGTCTGCCAAGATGGCGTGCATCGGGTTATGATGTTGAATCTAGCGCTTCGAGTGATGCTATCCTTAAAGCCAGTGCTGCAAGTGAGGCAATAGTGAAAGTATATCAGGGACAAGCAGTTGGGCCAGACGGTAAGAGATTCGAGTACTTTGCGTTTCTGAACTTGGCACAAAATGTGGTGTGTTTAATCTGGTCATATATAATGATAAAGATGTGGTCTAGTGGCAATTCTGGTGGTGCTCCTTGGTGGTCCTACTGGAGTGTTGGTATTACCAACACCATTGGTCCTGCTATGGGAATCGAAGAAAGTTACCCAAAAACAAGCGCTACGTTGAGCATGAATTTATGGGGAACCATATACAATATGATTTTCATGTTTGGATGGCCGCATGGTAGTGGATTTGAGGCAGTTCACTTTTGCAGACAACATCCAGAGGTGGCATGGGATATTTTTCTCTATTGTTGCTGTGCAAGGGGATTCAGCCTGATGTGGTGTCCAATAATATACTGA 597 0.4305 MMEKDFFSAAHVWWMFRVFGHDKIWVLDSGLPRWRASGYDVESSASSDAILKASAASEAIVKVYQGQAVGPDGKRFEYFAFLNLAQNVVCLIWSYIMIKMWSSGNSGGAPWWSYWSVGITNTIGPAMGIEESYPKTSATLSMNLWGTIYNMIFMFGWPHGSGFEAVHFCRQHPEVAWDIFLYCCCARGFSLMWCPIIY. 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04754 198 Gene3D - 2 54 IPR036873 -
Seca8g04754 198 ProSiteProfiles Rhodanese domain profile. 7 43 IPR001763 -
Seca8g04754 198 PANTHER THIOSULFATE SULFERTANSFERASE 5 63 IPR045078 GO:0016783
Seca8g04754 198 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 7 44 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04754 Seca-Chr8 132464588 132465184 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04754 4 71 Sulfurtransferasese or Rhodanese AT1G79230 83.824 1.40e-33 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04754 K01011 K15275 cave:132177726 130.568