Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04747 ATGGGAAAGCTCGAAGAAGAACAACCTCCTCTACCTTCCGCCGTCGCCGACGATTCTCGACGGAATGCGGCGGCGGAATGCACCTTCTCCGTCAGACCTAGATGCATTATCGTTCTGCTCTTCTCAGCCGCCGTTTTTCTCTCTGCCCTTTTCTGGTTGCCCCCTTTCATTCGCTTCGCAGATCAGAAGGATCTGCACTTCAATTCCAAGTATAAAGGTCATGATATTGTTGCCAGCTTTTTTGTTAACAAGACCATTTCTTTGCTAGAAGACAACATCTTGCAGCTTTCTGATGACATTTTTGATGAGATAGGGGTTCCCTCTACCAAAGTACCTCTCTCTCTAGTTTCTTTTTATAAACTTTATTACAATTGCATATTGATGTCTTTTGTATTTTTTAAAACCCAGGTGGTCATCTTGTCTCTAGATCCCGTAGCAGGGTCTAACACAACTAAAGTGGTGTTTGCTGTTGATCCTGATGGTAAATATTCAGAAATGTCTTCATTTGCCATTAGTTTGATAAGAGCGTCATTTAAATCCCTGGTTATGCACCAATCAAGCCTCCAGCTCACTCCATCCTTGTTTGGAGTACCCTCGTTTTTTGAAGTGCTGAAATTTAAGGGAGGGATCACTATAATTCCACAACAGAGTGCATTTCCTCTGCAGACTGTGCAAACACTATTCAACTTTACTTTGAATTTCCCTATTTATCAAATCCAATCAAATTTTAATGACCTAACAAGTCAGCTAAAGTCTGGATTACATTTGGCACCCTATGAGAACCTGTATGTCATCTTATCAAATTCTGAAGGTTCTACAGTTGCTGCTCCTACTATTGTTCAATCGTCTGTCCTACCTGCAGTTGGGATTACACCATCAAAGGAGAGGCTAAAGCAACTGGCACAAACCATCATGGGACGTCATTCATGGAACCTTGGGTTGAATAACACTAAATTTGGCAGGGTTAAGCAGGTTCGACTTTCGTCCATCTTGCAACACTCCCTTCATGGAAGTGGTGCTAATGGCCCTGCTCGGTCACCTTCCCCTGCCCCTCTGCCTCATCCACACCATCACCACCATTACCATCATCATCGGCACCATAATCATCACGGCGATGCCCATAAATTTCCTGCAACTTCACCTGCACCTGCACCTGCTCCTGCAATTGGGGAAGGTGCAACTCCACCTAAGGTTGGTTCTCCTAATGCTGCAAGAAGTATGCCTGCACCAGGGCGAAGGTCTTCTGCTCAGCCTCCTAATTGTCGATTTGGGTATAGAAAGAGGTCTACCCAAAATGCTCACAAACATGTGCATCTAACACCTGCAGTTGCCCCTACTATTGCTCCACACTCTCCTGTTTCCTTGCCAAAACCAAGGGTTGGAGCCCCAGCACATATCTCTCATTCAGTTCCTGCTTTGAGTCCTATACCAAATGTAGCTTTTGCGCATAATGAGCCCCCTCCCAAGAATGAACAGTCACCTGAACGTTCTAACACACTTTTTCATGGGCCATCACCTTCTTCATCTTCTGCAGGTTGTCTTGGGACTTTCAATTGGACATCTTTAATGTTTGTATTACTTGCATTATATGTATAA 1596 0.4424 MGKLEEEQPPLPSAVADDSRRNAAAECTFSVRPRCIIVLLFSAAVFLSALFWLPPFIRFADQKDLHFNSKYKGHDIVASFFVNKTISLLEDNILQLSDDIFDEIGVPSTKVPLSLVSFYKLYYNCILMSFVFFKTQVVILSLDPVAGSNTTKVVFAVDPDGKYSEMSSFAISLIRASFKSLVMHQSSLQLTPSLFGVPSFFEVLKFKGGITIIPQQSAFPLQTVQTLFNFTLNFPIYQIQSNFNDLTSQLKSGLHLAPYENLYVILSNSEGSTVAAPTIVQSSVLPAVGITPSKERLKQLAQTIMGRHSWNLGLNNTKFGRVKQVRLSSILQHSLHGSGANGPARSPSPAPLPHPHHHHHYHHHRHHNHHGDAHKFPATSPAPAPAPAIGEGATPPKVGSPNAARSMPAPGRRSSAQPPNCRFGYRKRSTQNAHKHVHLTPAVAPTIAPHSPVSLPKPRVGAPAHISHSVPALSPIPNVAFAHNEPPPKNEQSPERSNTLFHGPSPSSSSAGCLGTFNWTSLMFVLLALYV. 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04747 531 MobiDBLite consensus disorder prediction 491 510 - -
Seca8g04747 531 MobiDBLite consensus disorder prediction 352 372 - -
Seca8g04747 531 PANTHER F20B24.21 132 524 - -
Seca8g04747 531 MobiDBLite consensus disorder prediction 334 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04747 Seca-Chr8 132280892 132286970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04747 1 331 C3H Transcription Factor Family AT3G10810 50.592 9.33e-89 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04747 - - gmx:100818532 650.588