Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04719 ATGGCATCCAGCTCAATGTCATCTTCTGGATCATGGAGTGTTAAGGACAATAAAGCCTTTGAAAGGGCTCTAGCTGTTTATGACAAGGACACCCCTGACCGTTGGTACAATGTTGCAAGGGCTGTTGGTGGGAAAACTCCAGAGGAAGTGAAGAGGCACTATGATCTCCTTGTCCAGGACATTAGGCACATTGAGTCAGGGCAAGTGCCATTCCCAAATTACAAGAAAAGTGAAGCTTATGATGAGGAGAAAAGGGCTCAAAAACCTGAAGCTCCAGTGACCAAGTGGCATCAACAACAAATTAAAGAATATTATGGTTTTCTTTTCACCATCCAGCAACAACTTTTCTAG 351 0.4359 MASSSMSSSGSWSVKDNKAFERALAVYDKDTPDRWYNVARAVGGKTPEEVKRHYDLLVQDIRHIESGQVPFPNYKKSEAYDEEKRAQKPEAPVTKWHQQQIKEYYGFLFTIQQQLF. 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04719 116 ProSiteProfiles Myb-like domain profile. 4 58 IPR001005 -
Seca8g04719 116 FunFam Transcription factor SRM1 4 71 - -
Seca8g04719 116 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 84 IPR044636 GO:0003700
Seca8g04719 116 SMART sant 8 60 IPR001005 -
Seca8g04719 116 ProSiteProfiles SANT domain profile. 7 54 IPR017884 -
Seca8g04719 116 SUPERFAMILY Homeodomain-like 4 61 IPR009057 -
Seca8g04719 116 Gene3D - 2 71 - -
Seca8g04719 116 CDD SANT 18 54 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04719 Seca-Chr8 131832687 131834095 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Seca8g04719 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04719 - - gmx:778061 147.902