Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04710 ATGAAGGTTGCAGCTAGCAGTAACTTGAAAAGAGTTTCACTTGAATTAGGAGGAAAATCACCCCTCATAATTTTTGATGATGCTGATATAGTCAAAGCTGCTGAGCTTGCTCTATTTGGCCTCCTATTTAACAAGATCATTGCAATCTCACATATTTTACCGCAAGCAATTGTAATGGGTATTATCAGGAGTTGCTTCTCTTTCATAGCAGGGACAGTCATTGGGGTTTACTTGGCTCAGAACTATCAAATTCCTAACCTCAGGAAGCTAGCTGACACTGCCTTGATCGAGAAGAAGGTGCTGATGATGATTACTACGATTAGAATATCTATGACACTACATTGGAATCAGGTTCTTGTTTTGGGATTTTCTTCAATTTGCTGCATGTCAGTTTTGTAA 399 0.3885 MKVAASSNLKRVSLELGGKSPLIIFDDADIVKAAELALFGLLFNKIIAISHILPQAIVMGIIRSCFSFIAGTVIGVYLAQNYQIPNLRKLADTALIEKKVLMMITTIRISMTLHWNQVLVLGFSSICCMSVL. 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04710 132 Pfam Aldehyde dehydrogenase family 4 44 IPR015590 GO:0016491
Seca8g04710 132 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 4 17 IPR016162 GO:0016491
Seca8g04710 132 PANTHER OS07G0239500 PROTEIN 59 98 - -
Seca8g04710 132 SUPERFAMILY ALDH-like 1 44 IPR016161 GO:0016491
Seca8g04710 132 Pfam Domain of unknown function (DUF4535) 64 97 IPR027854 -
Seca8g04710 132 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 18 55 IPR016163 GO:0016620
Seca8g04710 132 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 14 21 IPR029510 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04710 Seca-Chr8 131688415 131689312 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04710 1 45 Aldehyde Dehydrogenase Gene Family AT3G24503 73.333 4.51e-16 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04710 K12355 - gmx:100817721 75.485