Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04703 ATGGCTGGAGTTGGTCTTCTCTCTACACCTTATACAGTGAAACAAGCTGGGTGGGTGAGCATGGTGCTGATGTTACTTTTTGCAGTCATTTGTTGTTATACAGCCACCCTTATGAGATATTGCTTTGAAAGCAAAGAAGGAATCAGTAGCTACCCAGATATAGGAGAAGCTGCATTTGGAAGATATGGCCGTATTTTTGTATCAATCATTTTGTACACTGAATTATATACATATTGTGTGGAATTCATAACCTTGGAAGGAGATAACCTCACTGGTCTGTTTCCTGGAACTTCCTTAGATTTTGGAAGTTTCCAGTTAGATTCCATGCACTTGTTTGGAGTTTTGGCTGCACTTATTATTCTCCCTACTGTTTGGTTGAAGGATCTTCGAATAATCTCTTTCCTATCAGCTGGAGGGATTGGTGCAACACTATTGATTATTATCTCTGTGTTTTGTGTTGGGACAAATGCTGGATTCCATCACACTGGTCAATTTGTGAATTGGAGTGGCATTCCATTTGCTATTGGAATCTATGGCTTTTGCTTTGCAGGACATTCAGTTTTTCCAAATATATACCAGTCTATGGCTGACAAAAAACAATTTACTAAAGCATTAATAATATGTTTTGGTTTGTGTATTTTGATATATGGAAGCGTTGCAATCATAGGATTTCTCACGTTTGGTGATGGCACTTTGTCTCAGATAACATTGAATATGCCAGCAGGTGCATTTGCTTCCAAAGTTGCATTGTGGACAACAGTAATTAACCCATTAACTAAATATGCTTTGCTGATGAATCCACTGGCAAGGAGTGTGGAGGAATTGCTGCCTGATAGAATTTCAAGTAGTTATTGGTGTTTTATTCTTCTTAGAACAGCACTGGTTGCATCTACAGTTTGTGCTGCTTTTCTAATTCCATTTTTTGGGCTTGTGATGGCTTTAATTGGTTCTCTCTTCAGTATGCTTGTGTCAGTGATAATGCCAAGTTTATGTTTTCTGAAAATTGTGGGGAGAAAGGCTACAAAAGCACAGGTTGCACTGAGCGTCGTAATTGCTGCATTGGGAATCATTTGTGGACTCATTGGAACATATCGCTCTTTGTTGAATATTGCAGATAGCTATTAA 1125 0.3849 MAGVGLLSTPYTVKQAGWVSMVLMLLFAVICCYTATLMRYCFESKEGISSYPDIGEAAFGRYGRIFVSIILYTELYTYCVEFITLEGDNLTGLFPGTSLDFGSFQLDSMHLFGVLAALIILPTVWLKDLRIISFLSAGGIGATLLIIISVFCVGTNAGFHHTGQFVNWSGIPFAIGIYGFCFAGHSVFPNIYQSMADKKQFTKALIICFGLCILIYGSVAIIGFLTFGDGTLSQITLNMPAGAFASKVALWTTVINPLTKYALLMNPLARSVEELLPDRISSSYWCFILLRTALVASTVCAAFLIPFFGLVMALIGSLFSMLVSVIMPSLCFLKIVGRKATKAQVALSVVIAALGIICGLIGTYRSLLNIADSY. 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04703 374 Gene3D Amino acid/polyamine transporter I 1 372 - -
Seca8g04703 374 PANTHER OS05G0424000 PROTEIN-RELATED 3 353 - -
Seca8g04703 374 Pfam Transmembrane amino acid transporter protein 1 365 IPR013057 -
Seca8g04703 374 FunFam Amino acid transporter AVT1A 1 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04703 Seca-Chr8 131552326 131558932 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04703 1 314 Amino Acid or Auxin Permease AAAP Family AT2G41190 75.000 7.50e-177 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04703 K15015 - gmx:100790344 640.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g04703 8 131552326 131558932 Seca8g04703 8 131552326 131558932 ECH