Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04701 ATGGCCAGCAATAATAAGTATAATAGCAGCAACAAGGACAACGAGAAAGACCTTGAGATTTTGGTTAATGAGGATTTCTATGAAGGTGGCAACTACGCCAATGATGAGGGATATCTGCCACAGTCTTTCTCTTCTCAGCAATGGCCTCAAAGTTGCAAAGAGACTACAGATTCTTTTACAATTGCTAGCCCTCCAAGTTTTGGTCATTCCAGTTTTGACAATCATTCAAAGAGTAACTCAGACACAGATGAAAAGACTCCTTTTCTATCAAGTCAGAAAGGTCCGGTTCGTAATGGATGCAGCTTCACTCAAACAGCTCTCAATGGGATTAATTTGATGGCTGGAGTTGCCCTTATATGTACACCTGATACAGTGAAGCAAGCTGGGTGGGTGAGCATTCTGCTGATGCTGCTTCTTGCAGTTATTTGTTTTTATACAGGAACCCTTATGAGATACTGCCTTGAAAGCAAAGAAGGAATCAGTACCTACCCAGATATAGGAGAAGCTGCCTTTGGAAGATATGGTCGTATTCTTATATCAATCATTTTGTACTCTGAATTATATGCAATTTGTGTGGATTTCATCACCTTGGAAGCAGATAACCTCACTGGTCTGTTTCCAGGAACATCCTTAGATTTGGGTAGTTTCCAGTTGGATTCCATGCACTTGTTTGGAGTTTTGGCTGGACTTATCATTCTCCCTACTGTTTGGTTGAAAGATCTTCGAATGCTCTCTTACCTAGCAGCTGGAGGGATTGTTGCAACACTATTGATTATTATCTGTGTGTTCTGTGTTGGGACAAATGTTGGATTCCATCACACTGGTCAATTTGTAAATTGGAGTGGCATTCCATTTGCTATTGGGATCTATTGCTTTTGCTTTGCAGGACATTCAGTTTTTCCAAATATGTACCACTCTATGGCTGACAAATCCCAATTTACTAAAGTATTAATACTAAGTTTTGGTGTGCCTAGTTTGATATATGGAAGCGTAGCAATCATGGGATTTCTCATGTTTGGTGATGAAACTTTATCTCAAATAACATTGAATATGCCACTAGGTCCAGTTGCCTCCAGAATTGCATTGTGGGCAACAGTAGTTAATCCATTAACTAAATATCCTTTAGATTAG 1131 0.3961 MASNNKYNSSNKDNEKDLEILVNEDFYEGGNYANDEGYLPQSFSSQQWPQSCKETTDSFTIASPPSFGHSSFDNHSKSNSDTDEKTPFLSSQKGPVRNGCSFTQTALNGINLMAGVALICTPDTVKQAGWVSILLMLLLAVICFYTGTLMRYCLESKEGISTYPDIGEAAFGRYGRILISIILYSELYAICVDFITLEADNLTGLFPGTSLDLGSFQLDSMHLFGVLAGLIILPTVWLKDLRMLSYLAAGGIVATLLIIICVFCVGTNVGFHHTGQFVNWSGIPFAIGIYCFCFAGHSVFPNMYHSMADKSQFTKVLILSFGVPSLIYGSVAIMGFLMFGDETLSQITLNMPLGPVASRIALWATVVNPLTKYPLD. 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04701 376 Pfam Transmembrane amino acid transporter protein 100 375 IPR013057 -
Seca8g04701 376 MobiDBLite consensus disorder prediction 70 94 - -
Seca8g04701 376 PANTHER OS05G0424000 PROTEIN-RELATED 105 367 - -
Seca8g04701 376 Gene3D Amino acid/polyamine transporter I 98 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04701 Seca-Chr8 131520567 131523344 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04701 4 375 Amino Acid or Auxin Permease AAAP Family AT2G41190 55.087 2.35e-146 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04701 K15015 - gmx:100790344 498.434