Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04700 ATGGCCAGTAATAACAAGGACAACAAGAAAGACCTTGAGTTTCTGGTGAACGAAGATTTCTTCGTAGGTGACAAGTACCTGAGTGAGAGTACTAGCAGTGATGATGATGAGGGAAATCAGCCTCAGTCTTTCTCTTCTCACCAATGGCCTCAAAGTTACAAAGAGACTACAGATTTTTTTACAATTTCTAGCCCTCAAAATTTTGAATCAATTCTACGAGGACCAAGTTTTCGTCGTTCCAGTTTTGACAATCGTAACTCAGACACAGATGGAAAGGCTCCTTTTCTATCAAGTCAGGAAGATGTTACTACTCAATCAACATGGTGGCAGAAAGGTCCATTGCAAAAGCATTCCACTGTAGAATCGCCCCCTCGTTATGGATGCACCTTCACTCAAACAGTCCTCAATGCAATTAATTTGATGGCTGGAGTTGGCCTTCTATCTACACCTGATACAGTGAAGCAAGCTGGGTGGGTGAGCATGATGATGATGCTGCTTCTTGCAGTTATTTGTTGTTATACAGGCACTCTTATGAGATATTGCTTTGAAAGCAAAGAAGGAATCAGTAGCTACCCAGATATAGGAGAAGCTGCATTTGGAAGATATGGCCGTATTATTGTATCAATCATTTTGTACACTGAACTATATTCAGTTTGTGTGGAATTCATCACCTTGGAAGGAGATAACCTCACTGGTCTGTTTCCTGGAACATCCTTAGATTTGGGAAGTTTCCGGTTGGATTCCATGCACTTGTTTGGAATTTTGGTTGCACTTATCATTCTCCCTACTGTTTGGTTGAGGGATCTTCGAATACTCTCTTATCTATCAGCTGGAGGGATTGTTGCAACACTATTAATTATTACCTGTGTGTTTTGTGTTGGGACAAATGTTGGATTCCATCACACTGGTCAATTTGTAAATTGGAGTGGCATTCCTTTTGCTATTGGGATCTATAGCTTTTGCTTTGCAGGACATTCAGTTTTTCCAAATATATACCACTCTATGGCTGACAAAACACAATTTACTAAAGTGTTAATACTATGTTTTGGTGTGTCTATATTGATATATGGAAGCATAGCAATCATGGGATTTCTCATGTTTGGTGATGACACTTTATCTCAGATAACATTGAATATGCCACTAGGTGCAGTTGCCTCCAAAATTGCATTGTGGACAACAGTGATTAACCCATTAACTAAATATCCTTTTTGCCATAGATTAGTTGTTTATGATATTGGAAAAAAGGAGATGGCTTGA 1257 0.3922 MASNNKDNKKDLEFLVNEDFFVGDKYLSESTSSDDDEGNQPQSFSSHQWPQSYKETTDFFTISSPQNFESILRGPSFRRSSFDNRNSDTDGKAPFLSSQEDVTTQSTWWQKGPLQKHSTVESPPRYGCTFTQTVLNAINLMAGVGLLSTPDTVKQAGWVSMMMMLLLAVICCYTGTLMRYCFESKEGISSYPDIGEAAFGRYGRIIVSIILYTELYSVCVEFITLEGDNLTGLFPGTSLDLGSFRLDSMHLFGILVALIILPTVWLRDLRILSYLSAGGIVATLLIITCVFCVGTNVGFHHTGQFVNWSGIPFAIGIYSFCFAGHSVFPNIYHSMADKTQFTKVLILCFGVSILIYGSIAIMGFLMFGDDTLSQITLNMPLGAVASKIALWTTVINPLTKYPFCHRLVVYDIGKKEMA. 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04700 418 MobiDBLite consensus disorder prediction 33 51 - -
Seca8g04700 418 Pfam Transmembrane amino acid transporter protein 129 404 IPR013057 -
Seca8g04700 418 MobiDBLite consensus disorder prediction 27 51 - -
Seca8g04700 418 MobiDBLite consensus disorder prediction 79 99 - -
Seca8g04700 418 PANTHER OS05G0424000 PROTEIN-RELATED 133 395 - -
Seca8g04700 418 Gene3D Amino acid/polyamine transporter I 127 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04700 Seca-Chr8 131442248 131446207 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04700 3 401 Amino Acid or Auxin Permease AAAP Family AT2G41190 57.920 1.66e-165 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04700 K15015 - gmx:100790344 584.334