Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04680 ATGCTTGAGTTTGATTCTGAACTGGATGCATATAATTTTTATTGTGAATATGCGAAATTCAAAGGTTTTGCGGTTAGGAAAGATGATGTATATCGTGATCGTAATAGGTTTATTACTATGAGGCAATTGGTCTGTAACAGACAGGGGGAAAGGAGTGAGAAACATTTAAATAGGCTTCAACTGTATTTAGATAATAATAGTGGTAAATGGAGGGTTGGAATGTTTGAGTCACAACACAATCATGAGCTTACTCCTGCAAATATGGTTCATTTGATGCCTGCTTATCGTGGTTTGAGTGCTGATGATAAGGCACAAGTAAATAGTCTTCACTTATATGGTGTTAGGACTTGTCATATAATGGGGCTAATAATGGGTCAGAAAGGTGGTCACTCAGATTTGGGATTTTGTAAGAAGGACTTGTACAATCACATTGAAAAGGAAAATAGGGCCAAAATAGAGGATGGAGATGCTTTTACTGCTTTGTGCTATCTTCAAGCTAAGTATGATAGTAATCCAATGAAATTTGTTAAGTTCACAACTACTGAAGATGATAGGCTTGAAAACTTGTTTTGGGCTGATGTAGGTAGCAGAATTGATTATGCTTGTTTCGGTGATGAAGTTGCATTTGACAAAACATATAAAAAAACAAGTATAACGGGCCTTTGGTAA 669 0.3602 MLEFDSELDAYNFYCEYAKFKGFAVRKDDVYRDRNRFITMRQLVCNRQGERSEKHLNRLQLYLDNNSGKWRVGMFESQHNHELTPANMVHLMPAYRGLSADDKAQVNSLHLYGVRTCHIMGLIMGQKGGHSDLGFCKKDLYNHIEKENRAKIEDGDAFTALCYLQAKYDSNPMKFVKFTTTEDDRLENLFWADVGSRIDYACFGDEVAFDKTYKKTSITGLW. 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04680 222 PANTHER OS01G0519700 PROTEIN 3 211 - -
Seca8g04680 222 Pfam FAR1 DNA-binding domain 12 56 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04680 Seca-Chr8 131234729 131235451 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca8g04680 FAR1 7.4e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04680 - - ccaj:109792835 245.743