Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04659 ATGGACAACATCTTGTTAATGAATCTGGTAATAAGGATTCACATGTTGGTGATTCAGGTGCTAATAGTGGTCAAGGACCTTACATTGGAATGGAATTTGAGTCAAGGGAAAATGCTCATTTATTCTACATTCGTTATGCTAAATATGTTGGATTTGGTGTATCAACTAAAACTAGTTGCCGTTCAAAAATTTTCTAGGGAGTTTATTGATGTGATATATGCTTGCACAAGACATGGGAGAAAACGAGAATCATCTGCACTTAATCCACGTCCTTGTGTCAAGGTGGAATGTGAGGCTAGCTTACGTATTAAAAGAAATTGTGATGGAAAATGGGTTGTTCATAGCTTCATCAAAGATCACAATCATGAACTTTTTCCCACACATGCACACTATTTTCCTTGTCATAGAGGCATAAATCTAGCTCAAAAGCAATGCATTGAAACTTTGCAACATGTTGGAGTGAGAACAAGCAAAATTTATGCCACAATGGCCAAACAACATGGAGGATATGAAAACATAGGGTGCTTGGAGAAAGATATTAGAAATCATTTGGATAAGGGTCGTCGATTGGCTTTAGAGTCAGGAGATGCAAATACAATGTTGGAGTGTTTTATGCTCATGCAAGAAGAAAATCCAAGATTTTTTTATGCAATTGATTTGGATGACGAAGATCGTGTGAAAAATATATTTTGGGTGGATGCAAAAGGTAGAGATGATTATGAAGAGTTTGGAGATGTAATTTCATTTGATACAACATACATCACAAACAAGTATAAAATGCCATTTGCTCCATTCATTGGGGTGAATAATCACTTTCAGTCAAGATTACTTGGTTGTGCATTACTAGCAGATGAGTCTTCAAAAACATTCACATGGTTGATGAAAACATGGCTTATAGCTATGAGTGGCAAGCCTCCAAATGCAATAATTACAGATCAAGATAAAGCAATGAAATCAGCTATTAAAGAGGTGCTTCCAAGTGCTCGACATCGCTTTTGTCTTTGGCATATACTGAGAAAGGTACCTGAGAAGCTTGGTCATGTATTAAGAAAACATGAAGATTTCATGACATTTCTTAACACATGCATTTACAAGTCTTGGTCAAAGAAGCAATTTGAAGATAGATGGCAAGAAATGCTTGAAAAATTTGAACTATTGGAAGATGAATGGATTCAATCTTTATTTGAAGAACGTGAGCATTGGGTTCCTGTTTACCTGAAGGATACATTTTTTGGTGGCATGTCAACAACTCAGATCAGAGAGCATCAACTCATTTTTTGA 1281 0.3607 MDNILLMNLVIRIHMLVIQVLIVVKDLTLEWNLSQGKMLIYSTFVMLNMLDLVYQLKLVAVQKFSREFIDVIYACTRHGRKRESSALNPRPCVKVECEASLRIKRNCDGKWVVHSFIKDHNHELFPTHAHYFPCHRGINLAQKQCIETLQHVGVRTSKIYATMAKQHGGYENIGCLEKDIRNHLDKGRRLALESGDANTMLECFMLMQEENPRFFYAIDLDDEDRVKNIFWVDAKGRDDYEEFGDVISFDTTYITNKYKMPFAPFIGVNNHFQSRLLGCALLADESSKTFTWLMKTWLIAMSGKPPNAIITDQDKAMKSAIKEVLPSARHRFCLWHILRKVPEKLGHVLRKHEDFMTFLNTCIYKSWSKKQFEDRWQEMLEKFELLEDEWIQSLFEEREHWVPVYLKDTFFGGMSTTQIREHQLIF. 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04659 426 Pfam MULE transposase domain 246 339 IPR018289 -
Seca8g04659 426 Coils Coil 369 389 - -
Seca8g04659 426 Pfam FAR1 DNA-binding domain 64 126 IPR004330 -
Seca8g04659 426 PANTHER OS01G0519700 PROTEIN 65 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04659 Seca-Chr8 130977399 130978679 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca8g04659 MULE 3.4e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04659 - - tpra:123886760 652.129