Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca8g04635 | ATGTTCTATCTATGCAGTGTTTCATCATCAGATCTTGTTTCTAAGTGGATGGGTGAAAGTGAAAAGTTGGTTTCAAATCTTTTCCAAATGGCTCGTGATAATGCTCCTTCAATTATTTTTATTGATGAAATAGATTCTTTATGTGGTCAACGAGGTGAAGGCAATGAAACTGAAGCATCTAGAAGAATCAAAACTGAACTTCTAGTGCAAATGCAGGGTGTGGGACATAATGATCAGAAAGTTCTCCTTCTTGCAGCCACAAATACTCCTTATGCTCTGGATCAGGCCATTCGACGACGCTTTGACAAAAGGATATACATCCCTCTCCCAGACCTGAAGGCAAGGCAGCACATATTTAAGGTGCATCTTGGAGATACTCCTCATAACCTAACTGAAAAAGATTTTGAAGAATTGGCACAAAAAACAGATGGATTTTCTGGTTCAGATATTTCTGTTTGTGTTAAGGATGTACTATTTGAACCTGTCCGTAAAACACGAGATGCTAAATTCTTCAGGAAAACCTCTAAAGGAATGTGGGTTCCTTGTGAACCTACTAAACGAGGAGCTGTTAATATTAGCCTGGAGGAACTTGATGCACAAGGCCTTGCTTCAAAGATTCTTCCACCACCCATCACCAGAGCAGATTTTGATAAAGTATTGGCCAGACAAAAGCCAACTGTTAGTAAAGCTGATCTTGAGGTGCATGAGAGATTCACCCAAGAGTTTGGAGAGGAGGGATGA | 741 | 0.4022 | MFYLCSVSSSDLVSKWMGESEKLVSNLFQMARDNAPSIIFIDEIDSLCGQRGEGNETEASRRIKTELLVQMQGVGHNDQKVLLLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHIFKVHLGDTPHNLTEKDFEELAQKTDGFSGSDISVCVKDVLFEPVRKTRDAKFFRKTSKGMWVPCEPTKRGAVNISLEELDAQGLASKILPPPITRADFDKVLARQKPTVSKADLEVHERFTQEFGEEG. | 247 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca8g04635 | 246 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 5 | 241 | IPR027417 | - | |
Seca8g04635 | 246 | Pfam | Vps4 C terminal oligomerisation domain | 179 | 243 | IPR015415 | - | |
Seca8g04635 | 246 | PANTHER | AAA DOMAIN-CONTAINING | 5 | 244 | - | - | |
Seca8g04635 | 246 | ProSitePatterns | AAA-protein family signature. | 81 | 100 | IPR003960 | GO:0005524|GO:0016887 | |
Seca8g04635 | 246 | Gene3D | - | 4 | 234 | IPR027417 | - | |
Seca8g04635 | 246 | Gene3D | - | 111 | 226 | - | - | |
Seca8g04635 | 246 | FunFam | vacuolar protein sorting-associated protein 4A | 111 | 226 | - | - | |
Seca8g04635 | 246 | Pfam | ATPase family associated with various cellular activities (AAA) | 3 | 109 | IPR003959 | GO:0005524|GO:0016887 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca8g04635 | Seca-Chr8 | 130438161 | 130444937 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca8g04635 | 6 | 167 | Calmodulin-binding Proteins | AT3G56690 | 35.366 | 7.32e-26 | 103 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca8g04635 | K12196 | - | csav:115706151 | 447.588 |