Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04634 ATGGACGGTTTTGAAGAAGGCCCACTTGGCGGCCCACTGGTCCAACTCGATTGGGAAGCTTTCTTCGACAAGTTACCAGAATTCGAAGTCGATGATATTTTGCTGGAGGATGAGTCTCCTGTTGCAGTCGCCGATGGTCCCTCGCCGGATCCCATTCTATCGGAAATCGAGAACTTGCTTATGGCCGACACCGACGCCGGCAACGGCGAAGTCCTTCCCGGAACGCCTTCGTCGGAGTCCGACTACGACAAGCTTCTGGCGGAGATACTCGTCGAGCCGCGCCCTGATTCTGAGGAAGGTTCGGTTCCTTCTGACAAAGAGAGAGTCGATCCAGTAACTCCCGAAGAGGCTGCTGATGAACCTATGTCCAAGAAGATAAAAAGGCAGATGAGAAACAGGGATGCTGCTGTGAGATCCAGGGAGAGGAAGAAGATGTATGTGAAAAACCTTGAGATGAAGAGTAGGTATTATGAAGGGGAATGCAAAAGACTGGCGCATTTGCTCCAGTGTTGCTATGCTGAGAACCACGCTTTGCGGCTTTGTTTGCAATCGCGTGGTGCATTTGGTGCTCCCGTGACCATGCAGGAGTCTGCTGTGCTCTTGTTGGAATCCCTGCTGCTGGGTTCCCTGCTGTGGTTCACGGGCATCATGTGCCAACTCAGTCTACCCCTGATACTGTGGCTAACCGCAGTACTTCCAAGAGAAAACATGGAACAGAAAGGCCTAAGAAAGGTGAGTCGAAAAGGGCCAGAAAGTAAGATCTGTGAGTATTCCCCGATGCAATCATTTGTAAAGAGTAGAAGATGCCGAGCTTCAAGAACAAAGATGAAATTTGATTTTTTGTCATGTTCTATAACTTCTGAAGTGGGGGCCTGTTAG 879 0.5006 MDGFEEGPLGGPLVQLDWEAFFDKLPEFEVDDILLEDESPVAVADGPSPDPILSEIENLLMADTDAGNGEVLPGTPSSESDYDKLLAEILVEPRPDSEEGSVPSDKERVDPVTPEEAADEPMSKKIKRQMRNRDAAVRSRERKKMYVKNLEMKSRYYEGECKRLAHLLQCCYAENHALRLCLQSRGAFGAPVTMQESAVLLLESLLLGSLLWFTGIMCQLSLPLILWLTAVLPRENMEQKGLRKVSRKGPESKICEYSPMQSFVKSRRCRASRTKMKFDFLSCSITSEVGAC. 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04634 292 CDD bZIP_HY5-like 125 176 - -
Seca8g04634 292 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 127 142 IPR004827 GO:0003700|GO:0006355
Seca8g04634 292 SMART brlzneu 120 184 IPR004827 GO:0003700|GO:0006355
Seca8g04634 292 Gene3D - 123 183 - -
Seca8g04634 292 MobiDBLite consensus disorder prediction 92 134 - -
Seca8g04634 292 Pfam bZIP transcription factor 123 168 IPR004827 GO:0003700|GO:0006355
Seca8g04634 292 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 15 252 - -
Seca8g04634 292 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 122 164 IPR004827 GO:0003700|GO:0006355
Seca8g04634 292 SUPERFAMILY Leucine zipper domain 124 180 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04634 Seca-Chr8 130430057 130433103 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04634 48 282 bZIP Transcription Factor Family AT1G42990 35.821 7.83e-19 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca8g04634 bZIP_1 1.8e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04634 - - gmx:778132 331.257