Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04603 ATGAAGAACTCTGCTTCAGATCAGAGCTTTTACATTGACAGCGATGAAGAAGATGTGGAAAAGGATTTGAACAAAGACGAACAAGATGGAAACGATTCGGATTATTCCAATGACTCCAATGATAACCAGGCACAGAGAAAACCCAGTTCTTACAGCATGGCATGGCCGCAAAGTTACAGGCAATCCATTGATCTATATGGTAGCGTGCCATCACCAAATATAGGATTTCTTGGCACTACATCACTGTCAAGATTAGGCAGTTCTTTTCTCTCTTCAACTTTCATAGGGAAGCACACTCCTGAATTTGTGCCACCAGTGAAAAAGCCTCTGTTACAGCCAGCAGTTGATGAGCAACAGCGACGTAGCTCTCATACCTTGCTTCCTCGCCATCCATCTAGGAAAGCTTCCATTAGGAAGGATGTTTCCAAGGTTTCTCATGAAGTTCATATTCCTGGCCAATGCTCTTTTGGACAAGCTGTGCTTAATGGCATAAATGCCCTTTGTGGTGTAGGAATCCTTTCAACCCCTTACGCCCTTAGAGAAGGTGGATGGACTGCACTTTCTATCTTGTTAATATTTGCAGTGTTTTCCTTTTATACTGGGTTGCTCTTGCGTTATTGCTTGGATAGTGAACCTGGGCTTGAGACATACCCTGACATTGGGCAAGCTGCATTTGGTACTACTGGACGTGTTATCATTTCAATAATATTATACATGGAACTATATGCTTGTTGCATTGAATACATAATTGTGGAGAGCGACAACTTGTCTTCATTATTTCCGTATGCACACCTAAGTTTGGGTGGAATTGAATTGAATTCACACATTCTGTTCGCAATCTTGACAACTGTGGCTCTTCTTCCTACTGTTTGGCTCCGTGACCTACGCATTCTCAGTTATATCTCAGCTTGCGGAGTTATTGCAACGATTGTAGTGGTTCTATGCTTGTTCTGGGTTGGCTTGTTAGACAACGTTGAGTTTCATACCAAAGGAACAACAACACTCAATCTTGCAACTTTTCCTGTTGCTGTGGGTCTCTACGGTTACTGCTATGCAGGACATGCTGTGTTCCCAAACCTCTATACAGCCATGGCAAATCGAAATCAATTCCCTGCAGTGCTCTTAACATGTTTTGTTATTTGTACAACAATGTATTGTGCTGTAGCGATTTTGGGATACGCAATGTTTGGAGAAACTACACTCTCTCAGTATACTCTTAACATGCCCCCAGCCTTAGTTGCATCCAAGATTGCTGTGTGGACTACGGTGGTTAATCCATTTACCAAATATCCTTTATATATTTATTATGCACCAAACAGATGCATCTGTGCTTCCCATATATGCTTACAGTCTTACTTATACTGTGTGGAAAAAGTGATCCGGCATAAACAATAG 1395 0.4179 MKNSASDQSFYIDSDEEDVEKDLNKDEQDGNDSDYSNDSNDNQAQRKPSSYSMAWPQSYRQSIDLYGSVPSPNIGFLGTTSLSRLGSSFLSSTFIGKHTPEFVPPVKKPLLQPAVDEQQRRSSHTLLPRHPSRKASIRKDVSKVSHEVHIPGQCSFGQAVLNGINALCGVGILSTPYALREGGWTALSILLIFAVFSFYTGLLLRYCLDSEPGLETYPDIGQAAFGTTGRVIISIILYMELYACCIEYIIVESDNLSSLFPYAHLSLGGIELNSHILFAILTTVALLPTVWLRDLRILSYISACGVIATIVVVLCLFWVGLLDNVEFHTKGTTTLNLATFPVAVGLYGYCYAGHAVFPNLYTAMANRNQFPAVLLTCFVICTTMYCAVAILGYAMFGETTLSQYTLNMPPALVASKIAVWTTVVNPFTKYPLYIYYAPNRCICASHICLQSYLYCVEKVIRHKQ. 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04603 464 MobiDBLite consensus disorder prediction 1 53 - -
Seca8g04603 464 MobiDBLite consensus disorder prediction 35 53 - -
Seca8g04603 464 Pfam Transmembrane amino acid transporter protein 154 435 IPR013057 -
Seca8g04603 464 PANTHER OS05G0424000 PROTEIN-RELATED 162 433 - -
Seca8g04603 464 MobiDBLite consensus disorder prediction 114 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04603 Seca-Chr8 129822891 129830226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04603 1 434 Amino Acid or Auxin Permease AAAP Family AT2G39130 66.667 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04603 K15015 - gmx:100798108 679.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g04603 8 129822891 129830226 Seca8g04603 8 129822891 129830226 ECH