Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04594 ATGACCTCAAGGGATTTGAGGCTGCTTCTTTCTTTGCCCGTTGTGGCTTTGGGATTGTTTCACGGCGTGCAGTGTCAACAAACGAGTGACCTCGATAATCCAGTTGTTCTTTCATTTGTTACTCAGCTTGTGTACAGCCAAATCTCCAACTTAACCTCTCTTCTCAATCAACATATCAACGCCCGCTCCAGTTTCTGCGTCAAAGATCCGGATGCTGATTGGGATAAAGCGTTTAATTTTTCTTCCGATTTAGGCTTCGTTTCTTCTTGCATTCGGAAGACAAAAGGAGATATTACACAACGATTGTGTACAGCAGCAGAGATAAAGTTTTATTTAAATAGTTTATTTGAGAGATCTACAAGTTCCAGCTACTTAAAGCCTAACAAGAACTGCAATTTAACCTCATGGGTATCTGGTTGTGAACCAGGATGGGCCTGTAGTGTTCTCTCAAGCCAGCAGGTTGACCTTAGAAATTCACAGGAGATACCTGCAAGAACTACAAGCTGTCAAGCATGTTGTGAGGGTTTCTTCTGTCCTCATGGCATCACATGCATGATACCTTGCCCTCTAGGTTCTTATTGCCCTCTTGCTACACTCAATAACGCAACTGGCGTATGTGAACCATATCTCTATCAACTGCCTCCAATGCAGCCAAACCATACCTGTGGTGGAGCAAATATTTGGGCTGATGTCAGTAGCAGTAGTGAGACATTTTGTTCAGCAGGATCATATTGCCCTACAACTACCAAAAAAATTCCTTGCAGTAGTGGGCATTACTGCAGGATGGGTTCTACATCTGAGAAAAGATGTTTCAAGTTGAGTTCATGTAATTCAAACACCGTGACCCAAAATATGCATGCATATGGAATTATGCTCATTGCTGCTTTGAGTACTTTGCTACTCATTATTTACAGCTGTTCTGACAAAGTTCTCACTACTAGAGAAAGGAGAATGGCGAAGTCCAGAGAAGCAGCAGCCAGAAGTGTAAGAAAGACTGCAAATGCACGCCAAAAATGGAAAGCTGCAAAAGAAGCTGCAAAGAAGGGTGCAAGTGGACTGCAAGCTCAACTATCACGAACTTTTTCTCGTACAAAGGATGTGGTTGACCCGGAAGAAGTTAAAATTTTGAGTCAACCAGCTACAGAAACAGATATTGAATTCTTTTCACCTTCACATCCTATTACATCAAGCACTTTTGCAAGTTCATCTGCAGTGCCAAAGGAAAAAGGAAAAGAACCCAGAGATTTGAAACACATGATACATGAAATTGAAAATGATCCAGATATTAGTGACAGCTTTCATGTTGAAATAGAAAGTAGAGATAAAAATGTTACAGCAAAAGTGTCCAATGAAAAACAACTGCATACACATAGCCAGATTTTTAAATATGCATATGCTCAACTTGAGAAAGAGAAGGCTCAGCAACAAGAAAACAAGAGCCTTACCTTCTCAGGAGTAATTAGTATGGCAACCAAAAATGAACAAAGGAAAAGGCCTTTAATTGAAATTTCCTTTAAAGACCTAACTCTCACTTTGAAATCACAAAACAAACATATATTGAGATGTGTTACTGGGAAAACTAAACCTGGCCGCATCACTTCTGTCATGGGTCCATCAGGTGCTGGCAAAACAACATTTCTTTCAGCAATTGCTGGAAAGGCATTTGGATGCAAGGTAACTGGTTCCATTTTTATAAATGGAAAGAATGAATCAATCCATTCCTATAAGAAAATCATTGGCTTTGTGCCCCAAGATGATATAGTTCATGGGAACCTGACAGTAGAAGAAAATCTCCGGTTCAGTGCACAGTGCAGGCTATCCGCTGAGTTGTCAAAACCAGACAAAGTTCTGGTTGTTGAAAGAGTTATTGAATTCTTGGGGCTTCAGTCTGTGCGAAATTCTTTGGTTGGAACTGTAGAAAAGCGAGGGATCTCTGGTGGCCAAAGGAAACGAGTAAATGTTGGATTGGAAATGGTCATGGAACCTTCTCTTTTGATCTTGGATGAACCCACATCTGGTTTGGACAGTGCATCATCTCTACTGCTCCTTAGAGCACTAAGACGTGAAGCACTTGAAGGAGTCAACATTTGCATGGTGGTTCACCAACCCAGCTATGCCTTGTTTAAAATGTTTGATGACTTGATACTCCTGGCGAAAGGTGGTCTTACTGTATATCATGGATCAGTCAAGAAAGTTGAAGAATATTTTGCAGGCCTTGGGATAATTGTACCTGAGCGCATTAATCCTCCAGATTACTTCATTGACATTTTGGAGGGCATAGCAGTGCCTAGTGGAAGTTCAGGAGTCAGTTATAAAGAGCTTCCAGTTAGATGGATGATTCATAATGGATACCCTGTACCTCTTGATATACGGCAGAACGTAGCACACTTTGATATGTACCTAAATGTAAGCCCATCTAAAGAAATAGATCCTGACAGCTCTAGCCATGCGGAAAGAAGCTTTGCCGGAGAATTATGGCAAGATGTGAGAAATGTTGTGGAACTAAAGGGGGAAAAGATAAGACTCAATTTTTTTAAATCCAAGGATTTATCTAACCGGAAGACTCCTGGTATATTCAAGCAATACAAGTACTTCCTTATACGGGTTGGGAAACAAAGATTACGGGAAGCTAAGAACCAAGCCATAGATTATTTAATATTATTGCTTGCAGGAGCGTGCCTAGGATCACTTACTAAAGCAAGTGATCAGTCCTTTGGTGCAGCTGGATACACGTATACGGTGATTGCTGTATCACTTTTATGCAAAATAGCAGCCTTGAGATCATTTGCTCTGGATAAATTACATTACTGGAGGGAGAGTGATTCAGGCATGAGCAGCTTGGCTTATTTTCTATCTAAAGACACAATTGATCATTTTAATACAGTGATCAAGCCTGTGGTGTACCTCTCTATGTTCTATTTCTTTACCTATCCAAGGTCTACTTTTGCTGATAATTACATCGTACTTCTTTGTCTTGTATACTGCGTGACTGGCATAGCATATGCACTGGCCATATTATTTCAACCTGGTGCAGCCCAACTATGGTCAGTACTTCTTCCAGTTGTTATGACACTCGTTGCAACACAACCAAAAGATAGTAACTTTTTGAAGGTCATAGATAATTTATGCTACTCTAAATGGGCTTTAGAAGCATTCGTAATTGCAAATGCTGAAAGGTATCATGGAGTGTGGCTCATAACTCGTTGTGGTTCACTACTGAAACGTGGCTATAGTCTCCATGATTGGAATTTGTGCATATCCATCCTCATTCTTATGGGTGTAATCGCTCGGGCACTAGCATTTTTTTGTATGCTTATCTTTCAAAAGAAGTAA 3333 0.4044 MTSRDLRLLLSLPVVALGLFHGVQCQQTSDLDNPVVLSFVTQLVYSQISNLTSLLNQHINARSSFCVKDPDADWDKAFNFSSDLGFVSSCIRKTKGDITQRLCTAAEIKFYLNSLFERSTSSSYLKPNKNCNLTSWVSGCEPGWACSVLSSQQVDLRNSQEIPARTTSCQACCEGFFCPHGITCMIPCPLGSYCPLATLNNATGVCEPYLYQLPPMQPNHTCGGANIWADVSSSSETFCSAGSYCPTTTKKIPCSSGHYCRMGSTSEKRCFKLSSCNSNTVTQNMHAYGIMLIAALSTLLLIIYSCSDKVLTTRERRMAKSREAAARSVRKTANARQKWKAAKEAAKKGASGLQAQLSRTFSRTKDVVDPEEVKILSQPATETDIEFFSPSHPITSSTFASSSAVPKEKGKEPRDLKHMIHEIENDPDISDSFHVEIESRDKNVTAKVSNEKQLHTHSQIFKYAYAQLEKEKAQQQENKSLTFSGVISMATKNEQRKRPLIEISFKDLTLTLKSQNKHILRCVTGKTKPGRITSVMGPSGAGKTTFLSAIAGKAFGCKVTGSIFINGKNESIHSYKKIIGFVPQDDIVHGNLTVEENLRFSAQCRLSAELSKPDKVLVVERVIEFLGLQSVRNSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSASSLLLLRALRREALEGVNICMVVHQPSYALFKMFDDLILLAKGGLTVYHGSVKKVEEYFAGLGIIVPERINPPDYFIDILEGIAVPSGSSGVSYKELPVRWMIHNGYPVPLDIRQNVAHFDMYLNVSPSKEIDPDSSSHAERSFAGELWQDVRNVVELKGEKIRLNFFKSKDLSNRKTPGIFKQYKYFLIRVGKQRLREAKNQAIDYLILLLAGACLGSLTKASDQSFGAAGYTYTVIAVSLLCKIAALRSFALDKLHYWRESDSGMSSLAYFLSKDTIDHFNTVIKPVVYLSMFYFFTYPRSTFADNYIVLLCLVYCVTGIAYALAILFQPGAAQLWSVLLPVVMTLVATQPKDSNFLKVIDNLCYSKWALEAFVIANAERYHGVWLITRCGSLLKRGYSLHDWNLCISILILMGVIARALAFFCMLIFQKK. 1111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04594 1110 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 241 1097 - -
Seca8g04594 1110 FunFam ABC transporter G family member 24 497 739 - -
Seca8g04594 1110 Gene3D - 501 737 IPR027417 -
Seca8g04594 1110 CDD ABCG_EPDR 501 727 - -
Seca8g04594 1110 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 503 737 IPR027417 -
Seca8g04594 1110 Pfam ABC-2 type transporter 701 1110 IPR043926 GO:0140359
Seca8g04594 1110 ProSitePatterns ABC transporters family signature. 644 658 IPR017871 GO:0005524|GO:0016887
Seca8g04594 1110 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 503 745 IPR003439 GO:0005524
Seca8g04594 1110 SMART AAA_5 529 721 IPR003593 GO:0016887
Seca8g04594 1110 Pfam ABC transporter 523 672 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04594 Seca-Chr8 129716185 129730896 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04594 502 704 Calmodulin-binding Proteins AT2G36910 27.751 2.88e-14 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04594 - - gmx:100783798 1882.07