Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04592 AACTGGTTGGATAAGGTTAATGAGGTCATTGAAAAGGCTAATAAGCTTCTGGAAGATTCTAACCATGCAGAGGTTGGGTGTTCAGGATGGGTGTTCCCCAATTTGATTTCACGACATCAGTTTAGCAAGAAAGCTAGTGAGATAGCAAAAGATGTTGTTCAAGTACGGGGAAAAGAGAATTTCAAGGGAGTTTGTTACCTTCCTCCTCTAGATGGAGCAGCCTCTTCTTCTGGCACAAGAGGTGATGAAAACCTGCTTGAGACAAGAGAGACATTTAAAGAGGAGATTGTGAAGGCTCTAAAAGACCCTAAAGCGCTCAACATTGGGGTTTATGGGCTTGGTGGTGTGGGTAAGACCACTCTGGTGAAGGAGGTTGCTAAAATAGCCAAGAAAGAGAAATTGTTCGATGCAGTGGTTATGGCCAATGTATCCAAAACTCCTGATATTAAAAAAATTCAAGGGGAGATTGCGGATCGATTGGGTCTGCAATTTGGTGAAAAGACCGTCCCTGGTAGAGCATCCCGATTAAGGCAGAGAATAATCAAAGAAGAGAAAACTATCCTTGTGATTCTAGATGATATCTGGACCACACTTGATTTGGAAGAAGTGGGAATTCCATCTGGGACTGGGAGTGACCATGATGCTTGCAAATTGTTGATGACTTCCAGAAATGAACATGTGCTGCTGAAAATGGACGCTCAAAAGGATTTCATTTTCAGGCTTGAAGCTTTGAGTGGACCAGAAACATGGAGCCTGTTTCAAAATATGGCTGGTGATGTGGTTAATGATATCAGTTTCAAAGATGTAGCAATTCAAGTGGCCCAAAAATGCGGAGGTTTGCCTCTTAGCGTAGTGACGGTTGCTCGAGCATTGAAAGATAGAAGAATTTATGCTTGGAAAGATGCATTAAGACAATTACAAAGTGTTGATCTTGATCATGAGGGGGTGAATGAGAAAACTTATTCTGCTCTGGAGTTGAGTTACAACTGGTTGGAGAGTGATGAAACGAAGCAACTCTTCTTGCTTTCTGCGGTAGTGAACGCTTTTCATGTGGAGTACTTATTGAAAGTTGCAATGGGTTTGGACATATTCAAGAGTATAAATACCGTGGAAGATGCAAGAAACAGACTTCACAACATAATCGAATCCTTAAAGGCGTCTTGTCTGTTGCTTGAAGGTAACACAAGTGTGTGGATCCAAATGCATGACATTGTTCGTGAAGTAGCTATCTCCATAGCATCTAGGGATCAACATGTATTTGTGGGGAAACCAAAGGCTGAGTTGAAGGAATGGCCAACTAAAGATTTTCTAAAAAGGTGTTCACAACTCATCTTACATAAGTGTCATATCCATGAACTTCCTCAAAGGTTAGATTGTCCTAACATTAAGTTTTTCTACTTGTATAGTTCAAATCGTTCCCTAGAAATCCCAGATACATTTTTTGAGGGAATGGGTAGCCTCAAAGTGTTAGATTTATCCTGCCTCAACTTGTCTTCATTACCCACTTCTTTTCGGTACCTAACTGACCTTCAAACATTGTGTCTGTATCACTGCATTTTGGAAAATATGGATGCAATAGGAGCTTTGAAAAAGTTAAAAATTCTTACCCTCTGCAAAAGTTCGATGATCAAATTGCCAAGCGAAATAGGGACATTGACTAATCTAAGAATGCTTGATTTGAGCGGTTCTAGAATTGAAGTAATCCCACCCAACATCATATCAAGCTTGACTAAATTGGAGGAGTTATATATGGGTTATACCTCTGTTAAGTGGGAAGATGAGAATTCGGCTAAGCAAAGTGAAAATGCAAGCCTTTCTGAGCTTCGACAATTGTCTAACTTGACAGCTCTACAATTACAAATTCGTGAGGCTTGGATTTTACCAAGGGACATGAAATTGGTGTTTGAGAAGCTGCAAAGATTTAAAATAGTCATAGGAGATGTCTGGGAATGGTATGACAATAAGGATCAAACCTTGAAAGCCTTGAAGCTCAAACTTGGTACCAATGTACATTTGGAGCACGAGATTAAAGCATTGATTAAAGGGGTTGAGAATTTGTGCCTGGATAAAGTACATGACATTCAGAATGTGTTGTATCGGGAAGGATTTCCATTGCTGAAGCACCTCCACATCCAAAATAATACCGAAATGAAGCACATCGTTGACTACTCTTTAGTGAGGAAGAATCACATCCAGCAGGTTTCCTTTCTCAACTTGGAAACACTAGTACTTGTCAATCTTCAAAACTTGGAGGAGATATGTCATGGCACACTTGCAGTTAATTCCTTCAGCAAGCTTAGAGTCATCAAAGTCCAAAATTGTAACCAATTAAAGTATCTTCTCTCAATTTTAATGGTGAAAGGACTTTCCCAACTTTCAGAGATCCAAGTTTCTCGATGCAATTCTATGGAGACAATAGTCCTTGGAGATGGTGACATAACTACTGACAAGATTGAGTTTTTCTCATTACATTCTTTGACTTTACAACATTTGCAGGCAGTTGATCATTTCTTCTCCCACGAGTTGAAGTCTCCCTGTGTTCCTCTACCGCTCTTTAGTGCTCAGGTTGCATTTCCTAAATTGGATACCCTTAAGTTGAGCTCACTCAAATTGAGTAAAATTTGGGAGGATAATCAACATTCTATGTACAACTTAAGAAGCTTGATTGTGGAGAGTTGTGGTGAGCTAAAATACTTATTCTCGTCTGCCACGGTGGGAAGTTTTATGAACCTCAAACGACTTGAAATTAGTAAATGTCATTTGATGGATGAGATAATAACTACAGAGGAGAAAAACACTGGAACTATTGCATCGGAAGAGGTTCGATTTTCCAAATTAGAGACAATCATATTGAAGGACATGCAAAACTTGAAGACAGTATGGCACTACCAATTTGACACAATGAAGACATTGCAAGTCAATAATTGTGAGAAAATATTGGTGGTTTTTCCTTTCTCAATGCGAAAAACTTATCATAATCTAGAGATGTTAGAGGTTACAAATTGTGCTTTAGTTGAAGAGATATTTGAATTGACTTCCAATGCAAAGGGAAATGTAGAGGATACAACACAGCTAAAAGGAATCACTTTAAATCAATTGCCGAAGTTGAAAAGGATTTGGAGTAGGGGCCCTCAAGGAATTCTTAGTTTTTGTAATCTAGAAAATGTTCATGTCAGTGAATGCAAAAGCTTGGAGTATCTATTTCCACTTTCTATAGCCACTAGTTGCTCACATCTCAAAGATCTTCAAATAAAATATTGTGGCAACATGAAGGAAATTGTTGCTGAGGAGAAAGAATCCACGTGCCCAACTCCTATATTATTTCAATTTAATCACCTAAATACTTTATTGCTTTGGGGCTTACTTAGACTCAAGGGTTTCTATGCAGGAAATTATACTTTGGTTTGTCCATCTTTGAGAAGCATAGATGTTTCATTTTGTGAAAAATTGAATTTATTCAAAGTTCCATCTACAGACAATGAAAGAGTTCAAGATGACAAACTCCCAGTTTTAGTGCAACAACCACTTTTCATAGATAAAGAGGTGATTCCAAACTTGGAGTGGTTGAGACTAGACCATGGGAATGCCAACGTGAAATTGCAAGCCCAACATTTAGGTGCCTTTTTCACCAAATTGACATTTCTTGGTTTGAATAGATATAAGAATGAAGAGGTTACATTTCCTTATTGGTTTCTCCAAAATGCAAAAGCTCTTCAGTCGCTATGTGTCGAACGTAGTTCCTTCAAGAAGATATTCCAAGATGAAAGACACGTAAGTGAGAAAATTTACATACGACTCAAAAGGTTGACACTTATTCAATTACCAGAACTTGAAGATATATGTGAAGAAGGATCCCAAGTTCACCCAATTATTGAGTTCCTTGAATACTTGAAAATTAATGAATGTCATAGTCTGACAAACTTGTTACCTTCCTCTGGTACCTTTAGTCACTTGATATCGTTGGAGATAACTAACTGCAATGGGCTGAAAAGCCTAATTACATCTCCTATGGCGCAAAGTCTGGGCAAGCTCAAAGAAATGAAGGTAAAAGATTGTAAGTCACTTAAAGAAATAATAACAGGAAAGGAAGATGTTAACATTGAATTTATTAGCTTGGAAGTATTGAAGCTGGAATGTTTGTCAAGCCTCAACAAATTTTGTAGCAATAAGTGCTCCTTGAAGTTTCCATTGCTGAAGGAAGTGTTTGTGAGGGAGTGTCCTCAATTGGAGATTTTTTCTGAGGGATATACAAGCACACCGTATCTTCGAAAAGTGAAAGTAACAGAAAATGGTGAAAAATGGCTTTGGAAGGGAAGCCTAAATGATACAATAAAGAACATGTTTGAAAATAAGGTACGCTTCCATATTTACTAG 4374 0.3827 NWLDKVNEVIEKANKLLEDSNHAEVGCSGWVFPNLISRHQFSKKASEIAKDVVQVRGKENFKGVCYLPPLDGAASSSGTRGDENLLETRETFKEEIVKALKDPKALNIGVYGLGGVGKTTLVKEVAKIAKKEKLFDAVVMANVSKTPDIKKIQGEIADRLGLQFGEKTVPGRASRLRQRIIKEEKTILVILDDIWTTLDLEEVGIPSGTGSDHDACKLLMTSRNEHVLLKMDAQKDFIFRLEALSGPETWSLFQNMAGDVVNDISFKDVAIQVAQKCGGLPLSVVTVARALKDRRIYAWKDALRQLQSVDLDHEGVNEKTYSALELSYNWLESDETKQLFLLSAVVNAFHVEYLLKVAMGLDIFKSINTVEDARNRLHNIIESLKASCLLLEGNTSVWIQMHDIVREVAISIASRDQHVFVGKPKAELKEWPTKDFLKRCSQLILHKCHIHELPQRLDCPNIKFFYLYSSNRSLEIPDTFFEGMGSLKVLDLSCLNLSSLPTSFRYLTDLQTLCLYHCILENMDAIGALKKLKILTLCKSSMIKLPSEIGTLTNLRMLDLSGSRIEVIPPNIISSLTKLEELYMGYTSVKWEDENSAKQSENASLSELRQLSNLTALQLQIREAWILPRDMKLVFEKLQRFKIVIGDVWEWYDNKDQTLKALKLKLGTNVHLEHEIKALIKGVENLCLDKVHDIQNVLYREGFPLLKHLHIQNNTEMKHIVDYSLVRKNHIQQVSFLNLETLVLVNLQNLEEICHGTLAVNSFSKLRVIKVQNCNQLKYLLSILMVKGLSQLSEIQVSRCNSMETIVLGDGDITTDKIEFFSLHSLTLQHLQAVDHFFSHELKSPCVPLPLFSAQVAFPKLDTLKLSSLKLSKIWEDNQHSMYNLRSLIVESCGELKYLFSSATVGSFMNLKRLEISKCHLMDEIITTEEKNTGTIASEEVRFSKLETIILKDMQNLKTVWHYQFDTMKTLQVNNCEKILVVFPFSMRKTYHNLEMLEVTNCALVEEIFELTSNAKGNVEDTTQLKGITLNQLPKLKRIWSRGPQGILSFCNLENVHVSECKSLEYLFPLSIATSCSHLKDLQIKYCGNMKEIVAEEKESTCPTPILFQFNHLNTLLLWGLLRLKGFYAGNYTLVCPSLRSIDVSFCEKLNLFKVPSTDNERVQDDKLPVLVQQPLFIDKEVIPNLEWLRLDHGNANVKLQAQHLGAFFTKLTFLGLNRYKNEEVTFPYWFLQNAKALQSLCVERSSFKKIFQDERHVSEKIYIRLKRLTLIQLPELEDICEEGSQVHPIIEFLEYLKINECHSLTNLLPSSGTFSHLISLEITNCNGLKSLITSPMAQSLGKLKEMKVKDCKSLKEIITGKEDVNIEFISLEVLKLECLSSLNKFCSNKCSLKFPLLKEVFVRECPQLEIFSEGYTSTPYLRKVKVTENGEKWLWKGSLNDTIKNMFENKVRFHIY. 1458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04592 1457 Gene3D Ribonuclease Inhibitor 1168 1366 IPR032675 -
Seca8g04592 1457 Gene3D - 75 239 IPR027417 -
Seca8g04592 1457 SMART AAA_5 104 245 IPR003593 GO:0016887
Seca8g04592 1457 Gene3D Ribonuclease Inhibitor 784 986 IPR032675 -
Seca8g04592 1457 Gene3D Ribonuclease Inhibitor 987 1167 IPR032675 -
Seca8g04592 1457 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 85 341 IPR027417 -
Seca8g04592 1457 SUPERFAMILY L domain-like 937 1152 - -
Seca8g04592 1457 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 993 1153 - -
Seca8g04592 1457 Gene3D - 244 331 IPR042197 -
Seca8g04592 1457 Pfam NB-ARC domain 90 329 IPR002182 GO:0043531
Seca8g04592 1457 SUPERFAMILY RNI-like 857 1359 - -
Seca8g04592 1457 Coils Coil 3 23 - -
Seca8g04592 1457 Gene3D Ribonuclease Inhibitor 411 643 IPR032675 -
Seca8g04592 1457 Pfam Leucine rich repeat 469 518 IPR001611 GO:0005515
Seca8g04592 1457 Pfam Leucine rich repeat 531 586 IPR001611 GO:0005515
Seca8g04592 1457 SMART LRR_typ_2 552 575 IPR003591 -
Seca8g04592 1457 SMART LRR_typ_2 484 506 IPR003591 -
Seca8g04592 1457 SUPERFAMILY L domain-like 400 920 - -
Seca8g04592 1457 PRINTS Disease resistance protein signature 107 122 - -
Seca8g04592 1457 PRINTS Disease resistance protein signature 181 195 - -
Seca8g04592 1457 PRINTS Disease resistance protein signature 277 291 - -
Seca8g04592 1457 PRINTS Disease resistance protein signature 550 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04592 Seca-Chr8 129670593 129680819 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04592 108 569 WRKY Transcription Factor Family AT5G45050 23.327 3.52e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04592 - - mtr:25482804 1723.37