Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04574 ATGGACGCCGCTGCACCGCCACCTCCACCAACTCCTGCGGCGGAACCCACCACAAAAGTACTGGAAACCACCTCATCGGGTCACCCTGCGTTCACCCGCATCCGCCTTGCCACCCCCTCCGACGTGCCTCACATCCACAAGATGATGTACCAAATGGCCGTCTTCGAACAACTCACACACCTTTTCTCTGCCACCGAGTCCTCTTTCTCCTCCACCCTCTTCTCTCCCACCATTCAACCCTTCCATTCCTTCACCGTCTTCATCCTCGAAGTCTCCCATAACCCCTTCACCGACACCCACTTTGTGGAAGTCCCTTTCTACGAGCCCATAACAAAAGTCGTGAACTTGGACCTCCCCATCGATGACCCAGAGAAGGAAACGTTCAGAACTCAGCAGGAGAGTGACGTTTTTGCTGCTGGGTTTGTGCTGTTTTTCCCAAACTATGCCTCTTTTCTGGGGAAGCCTGGGTTCTATGTTGAGGACTTGTTTGTGAGGGAGTGTTATAGGAGGAAAGGGTTTGGGAGGATGCTGCTCTCTGCGGTGGCAAAGCAGGCTGTGAAGATGGGGTATGGGAGAGTGGAGTGGATTGTGCTTGATAGGAATGTTAATGCTATTAAGTTTTATGAGGAGATGGGTGCTAACATCTTGCAGGAGTGGAAGCTTTGCAGGCTCACTGGGGAGGCTTTGCAGGCTCATGGATGCGCTGATTGA 711 0.5274 MDAAAPPPPPTPAAEPTTKVLETTSSGHPAFTRIRLATPSDVPHIHKMMYQMAVFEQLTHLFSATESSFSSTLFSPTIQPFHSFTVFILEVSHNPFTDTHFVEVPFYEPITKVVNLDLPIDDPEKETFRTQQESDVFAAGFVLFFPNYASFLGKPGFYVEDLFVRECYRRKGFGRMLLSAVAKQAVKMGYGRVEWIVLDRNVNAIKFYEEMGANILQEWKLCRLTGEALQAHGCAD. 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04574 236 FunFam probable acetyltransferase NATA1-like 32 235 - -
Seca8g04574 236 Pfam Acetyltransferase (GNAT) family 138 212 IPR000182 GO:0016747
Seca8g04574 236 CDD NAT_SF 139 194 - -
Seca8g04574 236 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 33 227 IPR016181 -
Seca8g04574 236 PANTHER DIAMINE N-ACETYLTRANSFERASE 32 231 - -
Seca8g04574 236 Gene3D - 32 234 - -
Seca8g04574 236 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 86 227 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04574 Seca-Chr8 129518874 129519584 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Seca8g04574 Acetyltransf_1 7.8e-13 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04574 K22883 - gmx:100782562 322.398