Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04571 ATGGCCGCCGCAGCACCGCCACCACCACCAACTCCCGCGGCGGAACCCGCCACCACAGTGCCGGAAACCACTCCATTGGGTCACCCGGTGTTCACCCGTATCCGTCTTGCCACTCCCTCCGACGTGCCTCACATCCACAAGATGGTGTACCAAATGGCCGTCTTTGAACACCTCACCCACCTCTTCTCTGCCACCGAGTCCTCTCTCTCCTCCACCCTCTTCTCTCCCACCGTTCAACCCTTCCACTCCTTCACTGTCTTCATCCTCGAAGTCTCCCCCACCCCCTTCATCGACACCCACTTCGCCGAAATCCCTTTCTACAAGCCCATAACAAAAGTCGTGAACTTGGACCTCCCCATCGATGACCCAGAAAAGGAATCGTTCAGAACTCAGGAAGGGAGTGACGTTTTCGCTGCTGGGTTTGTGCTATTTTTCCCAAACTATTCCTCTTTTCTGGGGAAGCCTGGGTTCTATGTTGAGGACGTGTTTGTGAGGGAGTGTTATAGGAGAAAGGGGTTTGGGAGGATGCTGCTCTCTGCGGTGGCGAAGCAGGCTGTGAAGATGGGGTATGGGAGGGTGGAGTGGGTTGTGCTTGATTGGAATGTCAATGCTATTAACTTTTATCAGGATATGGGTGCTAAAATCTTGCAGGAATGGAGGCTTTGCAGGCTCACTGGTGAGGCTTTGCAGGCTTATGAAGGTGCTGATTGA 711 0.5387 MAAAAPPPPPTPAAEPATTVPETTPLGHPVFTRIRLATPSDVPHIHKMVYQMAVFEHLTHLFSATESSLSSTLFSPTVQPFHSFTVFILEVSPTPFIDTHFAEIPFYKPITKVVNLDLPIDDPEKESFRTQEGSDVFAAGFVLFFPNYSSFLGKPGFYVEDVFVRECYRRKGFGRMLLSAVAKQAVKMGYGRVEWVVLDWNVNAINFYQDMGAKILQEWRLCRLTGEALQAYEGAD. 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04571 236 PANTHER DIAMINE N-ACETYLTRANSFERASE 32 233 - -
Seca8g04571 236 CDD NAT_SF 139 194 - -
Seca8g04571 236 FunFam probable acetyltransferase NATA1-like 32 235 - -
Seca8g04571 236 Pfam Acetyltransferase (GNAT) family 138 212 IPR000182 GO:0016747
Seca8g04571 236 MobiDBLite consensus disorder prediction 1 16 - -
Seca8g04571 236 Gene3D - 32 235 - -
Seca8g04571 236 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 86 236 IPR000182 GO:0016747
Seca8g04571 236 MobiDBLite consensus disorder prediction 1 24 - -
Seca8g04571 236 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 33 227 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04571 Seca-Chr8 129471242 129471952 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Seca8g04571 Acetyltransf_1 2.1e-13 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04571 K22883 - gmx:100782562 342.813