Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04556 ATGGTGCATTTAACAGAACCAGGGCACTGTAAAATCGGTAGAAGCTCGTCTGGAAGTCCTCACGTACGCAACAGATACTGCACAGACAAAGATAATAGGGATAATGTGTGTGAAGGTGAAACAATAAATAATTTGAATTCCCCAAATGAAGATAATGTTTGTTCTGATGAGCTTGCTCCTAATGTGTACAAAAGGATTTCTGAGCTTACAAATGAGGATAATAGATTACTTGAGTTTGATTCTGAACAAGATGGATATGAATTCTATAACCAGTATGCTAAATTCAAAGGATTTGTTGTTAGAAAAGATGATGATTATTGTAATCGTAATAACCTTATTACAATGAGGCAATTGGTATGTAACAGGCAAGGGGAAAGGAGTGAGAAGCATTTAAATAGGACAGATAGAGTTAGGGAAGCTAAGGCCATTACTCGTACCAATTGTCTTGCAAGGCTTCGATTGTACTTAGATAATAATAATAATAGGAAGTGGAGGGTTGGTATGTTTGAGCCACAACACAGTCATGAGCTAACTCCTGCAAATATGGTACATTTGTTACCTGCTTATCGTGGTTTGAGTATTGCTGGTAAGGCACGGTAA 600 0.3733 MVHLTEPGHCKIGRSSSGSPHVRNRYCTDKDNRDNVCEGETINNLNSPNEDNVCSDELAPNVYKRISELTNEDNRLLEFDSEQDGYEFYNQYAKFKGFVVRKDDDYCNRNNLITMRQLVCNRQGERSEKHLNRTDRVREAKAITRTNCLARLRLYLDNNNNRKWRVGMFEPQHSHELTPANMVHLLPAYRGLSIAGKAR. 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04556 199 MobiDBLite consensus disorder prediction 1 25 - -
Seca8g04556 199 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 38 181 - -
Seca8g04556 199 Pfam FAR1 DNA-binding domain 87 178 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04556 Seca-Chr8 129070251 129071578 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca8g04556 FAR1 1.7e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04556 - - ccaj:109792835 139.043