Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04547 ATGTCAATGTTGGATCTCAATGTTGACATTATCCATGCTGGTGCTGACTCAACCTGTGCTCAAAACGGGTTGCTACTGCAAAGTTTTCCACCTGAAATATCAGATTCTAAGACCTCCAACTCCTCAGTTTGGAATCCTGCAGAGGAAGATTCCTCAAACAATTCTTCTCCCTTCATATTTGACATATTGAAGAAAGAAAGAGATGGCTCAGAATTTCATACCACTGAAAGGGTCAAAGAAGAATACATGGCACAAGAGCCAGAGAATGTCACAAGGACCCTTTTCCCTGTAATTGCTGATAAAGGAGGTAGATTGTCTGATTCAAAGTTGGGGTTGTGGGGGAAGACTCAATGGCTGAACTTGTCAATCTCTGAGCCTGATGCACAAAATGGAGTGAGAACCTTGCAGCAGAAGCAACCTCAAGTTAGAAAAAGTAGGAGAGGACCAAGGTCTCGCAGCTCACACTATAGGGGTGTTACCTTCTACCGCAGGACTGGTAGATGGGAGTCACATATATGGGATTGTGGGAAACAGGTCTATTTGGGTAAGTGGATATTTGATTTGTTGGTTGGTGATTTAATATTTGGTATAGTTTTCATTAAAATATTGGTTGAAAGCTACTTTTGTGGCTGA 633 0.4186 MSMLDLNVDIIHAGADSTCAQNGLLLQSFPPEISDSKTSNSSVWNPAEEDSSNNSSPFIFDILKKERDGSEFHTTERVKEEYMAQEPENVTRTLFPVIADKGGRLSDSKLGLWGKTQWLNLSISEPDAQNGVRTLQQKQPQVRKSRRGPRSRSSHYRGVTFYRRTGRWESHIWDCGKQVYLGKWIFDLLVGDLIFGIVFIKILVESYFCG. 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04547 210 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 95 182 - -
Seca8g04547 210 MobiDBLite consensus disorder prediction 33 56 - -
Seca8g04547 210 Gene3D AP2/ERF domain 154 186 IPR036955 GO:0003700|GO:0006355
Seca8g04547 210 MobiDBLite consensus disorder prediction 130 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04547 Seca-Chr8 128930853 128935499 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04547 3 184 AP2-EREBP Transcription Factor Family AT5G60120 39.423 1.95e-24 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04547 K09284 - gmx:100776138 266.929