Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04527 ATGAGAATGCCGGGTATTCCTGTCGTCGCTCGTGCAACCTCATGCCATCCTGATGCTTGTGAGCATTTATCTGCGGAAGAGGGGCATGGTGCAGATGAGAGTCTTTCAATTTATTGCAAGCCTGTAGAGCTCTACAACATTCTTCAGCGACGTGCTATAAGAAATCCATCATTCCTTCAGAGATGTTTGCACTACAAGATACAGGCTAAGCACAAGAGAAGAATACAAATGACAGTTTCTCTGTCACGGACTGTTACTGAAAGCCAGACTGTGTTTCCATTGTACATCTGTCTGGCTAGGCTGATTTCTGATCTTGGAGTTCCAGAGTATTCTGCTGTGTATCGAATCAGTCGGATTTTCATCTTTCGAAATTCCCCTGGAATTGATTCGAACACTCAAGTCCAAGCAAAATTTACTCTTCCTGAAGTCATTAAGTTAGCTGTGGAAGCTAGATCTCGTTCACTTGCTGTCTTGTTTGTCAGCACCGTTGCAGTGGAAAACTCAAATTTATCATCTGGAGTCAATGCTAACTTGATGCCTTCGGATCTTCCTTCTTTTGAATCAGCAAGAGCTGGAGAATATTGCTTATGCGGGAAAGTATCTTTAGAATCACTTTATATGGCTTGGGACAGTTCTCCAAATTTTCATTTGGGACAGCGAGCTGAGATCATGTCAACTGTGGATTTGCTTCCATGCATTCTGAAGTCAGATTTTCAAAATGAGGATACAAGAGTCTCCATTCAAGTTCCCTGTAATTTGGAGAATGTGGGTACATCAAAGCAAGTACAAATCACAATTTCTGCAGAAGAGTTTGGTGCAAAAGAAAAATCTCCCTACCATTCATTTGCAGGCAGTGAAGTAGCATCATCATCATTAACTCGTATCATGCGGTTGAGGGAAGGAAATGTCATGTTTAATTACAGGTATTGCAATAATAAGTTGCAGAGAACAGAAGTCACGGAAGATTTCTCCTGTCCATTCTGTTTGGTTAGATGTGCTAGCTTTAAGGGTCTAAGATATCACTTGACCTCATCACATGATCTCTTCAACTTTGAATTTTGGGTATCGGATGAATGTCAGGCCGTAAATGTGTCTGTGAAAACTGATATCTGGAGATTTGAGATTGTTGCAGAAGGTATTGATCCAAAATTACAAACATTTTTCTTTTGTGCAAAGCCCCTTAGGCGCAGAAGACCAAAGAACCTATCTTTGAAAAATGCTAAGGATGCACGTCAATCAGTCTTAGAGTCTGACTTTCCTGCAGGGGACACTAATATTTTGGAGAAGGATGACGGAATTTCTACCACAAATATTCTATCACATCCTGACTCAGACTGTGTCCAATCAATATCTGAATATGATCTTGGCACTCCTGCTGTGCTTCAGTTTGCCAAGACAAGAAAGTTGTCAATGGAGCGTTCTGACCCACGAAACTGCGTCCTCTTAAGGAAGCGACAATTTTTTCACTCTCACAGAGCCCAGCCAATGGCAATTGAACACGTTCTATCAGATCAAGATAGTGAGGATGAAGTTGATGATGATGTTGCAGATTTTGAAGATCGAAGGGTATGA 1572 0.4128 MRMPGIPVVARATSCHPDACEHLSAEEGHGADESLSIYCKPVELYNILQRRAIRNPSFLQRCLHYKIQAKHKRRIQMTVSLSRTVTESQTVFPLYICLARLISDLGVPEYSAVYRISRIFIFRNSPGIDSNTQVQAKFTLPEVIKLAVEARSRSLAVLFVSTVAVENSNLSSGVNANLMPSDLPSFESARAGEYCLCGKVSLESLYMAWDSSPNFHLGQRAEIMSTVDLLPCILKSDFQNEDTRVSIQVPCNLENVGTSKQVQITISAEEFGAKEKSPYHSFAGSEVASSSLTRIMRLREGNVMFNYRYCNNKLQRTEVTEDFSCPFCLVRCASFKGLRYHLTSSHDLFNFEFWVSDECQAVNVSVKTDIWRFEIVAEGIDPKLQTFFFCAKPLRRRRPKNLSLKNAKDARQSVLESDFPAGDTNILEKDDGISTTNILSHPDSDCVQSISEYDLGTPAVLQFAKTRKLSMERSDPRNCVLLRKRQFFHSHRAQPMAIEHVLSDQDSEDEVDDDVADFEDRRV. 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04527 523 Pfam VEFS-Box of polycomb protein 469 522 IPR019135 -
Seca8g04527 523 PANTHER POLYCOMB GROUP PROTEIN 22 522 - -
Seca8g04527 523 MobiDBLite consensus disorder prediction 500 523 - -
Seca8g04527 523 CDD ZnB-Zn_EMF2-like 297 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04527 Seca-Chr8 128548852 128574536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04527 3 523 C2H2 Transcription Factor Family AT5G51230 53.442 3.85e-171 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04527 - - gmx:100798991 748.429