Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04526 ATGCTTGACAATTTTGTTGATGTGAGCAAAGTTGAGAAGCTAGTAATGCATCTGTGGAACTCCTTTGTGCGGAAGCAACGTGTGCTAGCAGATGGTCACATTCCATGGGCATGTGAGGCTTTCACAAAATTGCATGCCCCTGAGCTTTCCCAATCCAGCTCATTGGCAAGGTGCTGGAGACTCTTTATGATCAAATTATATAATCATGGTCTTCTAGATGCTCGGACCATGAATGACTGTAATATTATTCTTGGACAACATCCGAAGCAGAATTAA 276 0.4239 MLDNFVDVSKVEKLVMHLWNSFVRKQRVLADGHIPWACEAFTKLHAPELSQSSSLARCWRLFMIKLYNHGLLDARTMNDCNIILGQHPKQN. 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04526 91 Pfam VEFS-Box of polycomb protein 1 82 IPR019135 -
Seca8g04526 91 PANTHER POLYCOMB GROUP PROTEIN 1 88 - -
Seca8g04526 91 CDD VEFS-box_EMF2-like 1 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04526 Seca-Chr8 128547312 128548290 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04526 1 86 C2H2 Transcription Factor Family AT5G51230 70.930 6.68e-41 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04526 - - gmx:100798991 159.073