Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04506 ATGGCGAAGGAAGTAGAAGGGTTCAAGTTCGAACAGAGGCATGGAAAGGAGAGGGTGAGAGTTGCTCGCGTGTGGAAAGCCAAAGATGGACGCCACTTCATTGTGGAGTGGCGTGTCAGCATCAGCCTCCTCTCTGATTGCGTCGACTCCTATCTCCGTGATGACAATAAAGACATCGTTGCCACTGACACCATGAAGAACACCGTAACCCTCTTCTTTCTTCTTTTTCAATTTTTTAACTTCAACTTTTCGGTTACCTCTGATTACTCATTGCTTTATGTTAACCAAATTTCAAGATCTGAATCTGCGTGCTTCTTGTTGTATTGTGAAGTTTATCATTTTGATTCTCTTGGATCTTTGAAGGTCTATGCAAAAGCTAAGGAGTGCTCAGAAATACTTTCTGTGGAGGACTTTGCTATTGAACTTGCCAAACACTTCACATCATTTTACAAGCAGGTTACTACTGCTATTGTGAATATTGTGGAAAAACCCTGGGAGCGTGTTAGTGTGGATGGTCAACCTCATCAACATGGGTTCAAACTTGGATCTGAGAAGCATACAGCAGAGGCAATAGTAAAAAAGTCTGGTGCACTACAGTTGACTTCTGGTATTGAAGGATTTTCATTGTTGAAGACTACCAAGTCTGGTTTTGAGGGTTTTATCAGAGACAAGTACACAGCACTTCCTGAAACACGTGAAAGGATGCTGGCAACAGAAGTAACTGCACTATGGAGGTACACATATGAATCGCTGTATAGCATCCCTCAGAAGCCACTTTATTTTACAGACAGGTACTTGGACGTAAAAAGAGTTCTGACTGACACCTTTTTTGGCTCTCCAAAGGAGGGAGTCTATAGCCCATCTGTTCAAAGCACTCTCTACCAGATGGCAAAGGCCGCACTTAACAGATTTCCTGACATAGCTTCTGTCCAACTAAAGATGCCAAATATTCATTTCATACCAGTCAATATCTCAAACAAGGACGGTCCAATTGTAAAGTTTGATGATGATGTGTATTTACCAACGGATGAGCCACATGGATCAATTCAGGCTAGCTTGACCCGCAGTTGGTCAAGGATCCCTGAAAGTTGCACCAATGGTGAATTGCTTTGTATGGGCTCAGCCACTGCTGGCAATGGGTATATAAGTCTCACGCCAGAGCCACAAAGCAGCAATGCAAGTTCTGTATCATCTTCCGTAGCCAACAAAGTAGGGCGTGTTCTGTACCCTCATCCAGTGCATGCTTGGCCAGCAGTTATCTCTACCACCTTCACTCTTAGGATCAGTCCCTTTTCAAGAAACTCAACCAGTTCTGGTGATGGAATGGCACTAGTATTTGCACAAGATAATAGACCCTCACCAAATGATAGCTATGGATCATACCTTGGCATGTTTGATAGGTCTACACAAGGTGGTGTTTTTAGACAAATAGCTGTGGAGATGGACACTTTCATGAATGAATTTGATCCAGATGGAAACCACATTGGGATAGTCACAACAAGCATCACAAATACAGTTGCTTCTCAGAGTCTCAACAACACTGGCGTTGACCTCAAAAGTGGAAGAGACATTGAAGTTAAAGTTGACTATGATGGATGGACTAAAATGATTTATGTCTCTATGGGATACCCTGAAAGCCAATTAAAGAGTGTCCTTAACCATTCAATTATTCTACCTGATATAATTCCAAGCTCAGTTTTTGTTGGTTTCACAGCCTCCACTGGAAAGACTTTTCCTGAAAGCCATCAAGTCCTCAATTGGGTATTCACATCAGTGCCATTGCCAGTTCTTTCTGTTAAACCCAGTAAACTTGACACCATCAAGATCATATTGATAATTGTCATACCAGTGTTTTTGTCAGCAAGCTTAGTTCCTCTTATTTGGGAAGTTTGCAAGAGAAGACATGAGAGGGGTAACAAAAAGGAGGATATAGAAAGCCTATCAAGGACAGTACCAGATAACCCCAAGATGTTCACTTACAAGCAACTTTCAAAGGCCACATGCAACTTCAGGAAAGAAAATCTTTTGGGCAGAGGGGGATTTGGCAGTGTTTATAAAGGCATCATATTAGACTCTGGTAAAATAGTAGCAGTAAAGAAGGTTTCAGCAACCTCTAAGCAAGGTGAAAGAGAGTTCTTAGCTGAAATATGTACCATAGGGCGTCTTAGGCACAAAAACTTAGTGCAGCTTCAAGGTTGGTGCAATGAAGGTCAGAATCTTCTTTTGGTTTATGATTATATGCAAAATGGAAGCCTTGACCGGTTCATAGGTAAGGACATTCTGGATTGGCAAACCAGACACAAGATATTGACAGGATTGGCATCAGCATTACTTTACCTTCATGAAGAGTGTGGAAACCCTGTAGTTCACAGAGATGTTAAGCCTAACAATGTAATGCTGGATTCTAATTACAATGCTCATTTAGGAGATTTTGGATTAGCAAGATTACTCAAAAATGAGGACTCAGTTACTACAAACTTAGCTGGAACTCCAGGATATTTGGCCCCTGAAGTAGGCTTTACAGGGAAGGCCACCCCTGAATCAGATGTGTATAGCTTTGGCATGGTTGTACTTGAAGTCATTTGTGGTAAAAGGTCAAAATGTGTTATGGAAGAGAACAGTTTGGTAGACTATGTATGGAATTTACATGCTCAAAATTCATTGCTTGAGTGTGTTGACAAACAACTGAAAAACCAATTTGATGAGGAAGAAGCTAAGAGGGCATTGATGGTTGGATTAGCATGTTTGCATCCAGATTCCATGTTTAGGCCAAGGATGAGAAAAGTGGTGCACATTTTTCTGAATCCAAATGAACCTTTAATGGAATTACCAGGAATGAGACCCACTGGAGTTTATGTATCAGTTTCTTCTTGTACATCAATCACAGACTTTGGCTCTAGAGGTGAGTTACAGCTCCAATCATCCATAACATCATTGCACAAAAGTTCGATTTGTATGAAGTATGATCAGCAGTGA 2976 0.4123 MAKEVEGFKFEQRHGKERVRVARVWKAKDGRHFIVEWRVSISLLSDCVDSYLRDDNKDIVATDTMKNTVTLFFLLFQFFNFNFSVTSDYSLLYVNQISRSESACFLLYCEVYHFDSLGSLKVYAKAKECSEILSVEDFAIELAKHFTSFYKQVTTAIVNIVEKPWERVSVDGQPHQHGFKLGSEKHTAEAIVKKSGALQLTSGIEGFSLLKTTKSGFEGFIRDKYTALPETRERMLATEVTALWRYTYESLYSIPQKPLYFTDRYLDVKRVLTDTFFGSPKEGVYSPSVQSTLYQMAKAALNRFPDIASVQLKMPNIHFIPVNISNKDGPIVKFDDDVYLPTDEPHGSIQASLTRSWSRIPESCTNGELLCMGSATAGNGYISLTPEPQSSNASSVSSSVANKVGRVLYPHPVHAWPAVISTTFTLRISPFSRNSTSSGDGMALVFAQDNRPSPNDSYGSYLGMFDRSTQGGVFRQIAVEMDTFMNEFDPDGNHIGIVTTSITNTVASQSLNNTGVDLKSGRDIEVKVDYDGWTKMIYVSMGYPESQLKSVLNHSIILPDIIPSSVFVGFTASTGKTFPESHQVLNWVFTSVPLPVLSVKPSKLDTIKIILIIVIPVFLSASLVPLIWEVCKRRHERGNKKEDIESLSRTVPDNPKMFTYKQLSKATCNFRKENLLGRGGFGSVYKGIILDSGKIVAVKKVSATSKQGEREFLAEICTIGRLRHKNLVQLQGWCNEGQNLLLVYDYMQNGSLDRFIGKDILDWQTRHKILTGLASALLYLHEECGNPVVHRDVKPNNVMLDSNYNAHLGDFGLARLLKNEDSVTTNLAGTPGYLAPEVGFTGKATPESDVYSFGMVVLEVICGKRSKCVMEENSLVDYVWNLHAQNSLLECVDKQLKNQFDEEEAKRALMVGLACLHPDSMFRPRMRKVVHIFLNPNEPLMELPGMRPTGVYVSVSSCTSITDFGSRGELQLQSSITSLHKSSICMKYDQQ. 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04506 991 SUPERFAMILY Protein kinase-like (PK-like) 652 952 IPR011009 -
Seca8g04506 991 CDD STKc_IRAK 676 933 - -
Seca8g04506 991 CDD Uricase 13 355 - -
Seca8g04506 991 CDD lectin_legume_LecRK_Arcelin_ConA 365 591 IPR001220 GO:0030246
Seca8g04506 991 SUPERFAMILY Concanavalin A-like lectins/glucanases 357 592 IPR013320 -
Seca8g04506 991 PRINTS Uricase signature 55 69 IPR002042 -
Seca8g04506 991 PRINTS Uricase signature 15 26 IPR002042 -
Seca8g04506 991 Pfam Uricase 122 189 IPR002042 -
Seca8g04506 991 Pfam Uricase 201 350 IPR002042 -
Seca8g04506 991 Pfam Uricase 13 69 IPR002042 -
Seca8g04506 991 FunFam probable L-type lectin-domain containing receptor kinase S.5 655 746 - -
Seca8g04506 991 Pfam Protein kinase domain 671 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g04506 991 PANTHER - 395 935 - -
Seca8g04506 991 FunFam probable L-type lectin-domain containing receptor kinase S.5 747 941 - -
Seca8g04506 991 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 122 196 - -
Seca8g04506 991 NCBIfam urate oxidase 122 355 IPR002042 -
Seca8g04506 991 ProSiteProfiles Protein kinase domain profile. 670 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g04506 991 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 10 73 - -
Seca8g04506 991 Pfam Legume lectin domain 368 592 IPR001220 GO:0030246
Seca8g04506 991 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 196 356 - -
Seca8g04506 991 Gene3D Transferase(Phosphotransferase) domain 1 747 938 - -
Seca8g04506 991 SMART serkin_6 670 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g04506 991 Gene3D Phosphorylase Kinase; domain 1 655 746 - -
Seca8g04506 991 FunFam Putative L-type lectin-domain containing receptor kinase S.7 354 603 - -
Seca8g04506 991 ProSitePatterns Serine/Threonine protein kinases active-site signature. 788 800 IPR008271 GO:0004672|GO:0006468
Seca8g04506 991 ProSitePatterns Protein kinases ATP-binding region signature. 676 700 IPR017441 GO:0005524
Seca8g04506 991 Gene3D - 361 599 - -
Seca8g04506 991 Gene3D Urate Oxidase; 9 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04506 Seca-Chr8 128091965 128101322 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04506 362 969 Receptor kinase-like Gene Family AT5G55830 39.850 3.92e-123 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Seca8g04506 Pkinase 6.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04506 - - ccaj:109810929 973.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g04506 8 128091965 128101322 Seca8g04506 8 128091965 128101322 ECH