Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca8g04506 | ATGGCGAAGGAAGTAGAAGGGTTCAAGTTCGAACAGAGGCATGGAAAGGAGAGGGTGAGAGTTGCTCGCGTGTGGAAAGCCAAAGATGGACGCCACTTCATTGTGGAGTGGCGTGTCAGCATCAGCCTCCTCTCTGATTGCGTCGACTCCTATCTCCGTGATGACAATAAAGACATCGTTGCCACTGACACCATGAAGAACACCGTAACCCTCTTCTTTCTTCTTTTTCAATTTTTTAACTTCAACTTTTCGGTTACCTCTGATTACTCATTGCTTTATGTTAACCAAATTTCAAGATCTGAATCTGCGTGCTTCTTGTTGTATTGTGAAGTTTATCATTTTGATTCTCTTGGATCTTTGAAGGTCTATGCAAAAGCTAAGGAGTGCTCAGAAATACTTTCTGTGGAGGACTTTGCTATTGAACTTGCCAAACACTTCACATCATTTTACAAGCAGGTTACTACTGCTATTGTGAATATTGTGGAAAAACCCTGGGAGCGTGTTAGTGTGGATGGTCAACCTCATCAACATGGGTTCAAACTTGGATCTGAGAAGCATACAGCAGAGGCAATAGTAAAAAAGTCTGGTGCACTACAGTTGACTTCTGGTATTGAAGGATTTTCATTGTTGAAGACTACCAAGTCTGGTTTTGAGGGTTTTATCAGAGACAAGTACACAGCACTTCCTGAAACACGTGAAAGGATGCTGGCAACAGAAGTAACTGCACTATGGAGGTACACATATGAATCGCTGTATAGCATCCCTCAGAAGCCACTTTATTTTACAGACAGGTACTTGGACGTAAAAAGAGTTCTGACTGACACCTTTTTTGGCTCTCCAAAGGAGGGAGTCTATAGCCCATCTGTTCAAAGCACTCTCTACCAGATGGCAAAGGCCGCACTTAACAGATTTCCTGACATAGCTTCTGTCCAACTAAAGATGCCAAATATTCATTTCATACCAGTCAATATCTCAAACAAGGACGGTCCAATTGTAAAGTTTGATGATGATGTGTATTTACCAACGGATGAGCCACATGGATCAATTCAGGCTAGCTTGACCCGCAGTTGGTCAAGGATCCCTGAAAGTTGCACCAATGGTGAATTGCTTTGTATGGGCTCAGCCACTGCTGGCAATGGGTATATAAGTCTCACGCCAGAGCCACAAAGCAGCAATGCAAGTTCTGTATCATCTTCCGTAGCCAACAAAGTAGGGCGTGTTCTGTACCCTCATCCAGTGCATGCTTGGCCAGCAGTTATCTCTACCACCTTCACTCTTAGGATCAGTCCCTTTTCAAGAAACTCAACCAGTTCTGGTGATGGAATGGCACTAGTATTTGCACAAGATAATAGACCCTCACCAAATGATAGCTATGGATCATACCTTGGCATGTTTGATAGGTCTACACAAGGTGGTGTTTTTAGACAAATAGCTGTGGAGATGGACACTTTCATGAATGAATTTGATCCAGATGGAAACCACATTGGGATAGTCACAACAAGCATCACAAATACAGTTGCTTCTCAGAGTCTCAACAACACTGGCGTTGACCTCAAAAGTGGAAGAGACATTGAAGTTAAAGTTGACTATGATGGATGGACTAAAATGATTTATGTCTCTATGGGATACCCTGAAAGCCAATTAAAGAGTGTCCTTAACCATTCAATTATTCTACCTGATATAATTCCAAGCTCAGTTTTTGTTGGTTTCACAGCCTCCACTGGAAAGACTTTTCCTGAAAGCCATCAAGTCCTCAATTGGGTATTCACATCAGTGCCATTGCCAGTTCTTTCTGTTAAACCCAGTAAACTTGACACCATCAAGATCATATTGATAATTGTCATACCAGTGTTTTTGTCAGCAAGCTTAGTTCCTCTTATTTGGGAAGTTTGCAAGAGAAGACATGAGAGGGGTAACAAAAAGGAGGATATAGAAAGCCTATCAAGGACAGTACCAGATAACCCCAAGATGTTCACTTACAAGCAACTTTCAAAGGCCACATGCAACTTCAGGAAAGAAAATCTTTTGGGCAGAGGGGGATTTGGCAGTGTTTATAAAGGCATCATATTAGACTCTGGTAAAATAGTAGCAGTAAAGAAGGTTTCAGCAACCTCTAAGCAAGGTGAAAGAGAGTTCTTAGCTGAAATATGTACCATAGGGCGTCTTAGGCACAAAAACTTAGTGCAGCTTCAAGGTTGGTGCAATGAAGGTCAGAATCTTCTTTTGGTTTATGATTATATGCAAAATGGAAGCCTTGACCGGTTCATAGGTAAGGACATTCTGGATTGGCAAACCAGACACAAGATATTGACAGGATTGGCATCAGCATTACTTTACCTTCATGAAGAGTGTGGAAACCCTGTAGTTCACAGAGATGTTAAGCCTAACAATGTAATGCTGGATTCTAATTACAATGCTCATTTAGGAGATTTTGGATTAGCAAGATTACTCAAAAATGAGGACTCAGTTACTACAAACTTAGCTGGAACTCCAGGATATTTGGCCCCTGAAGTAGGCTTTACAGGGAAGGCCACCCCTGAATCAGATGTGTATAGCTTTGGCATGGTTGTACTTGAAGTCATTTGTGGTAAAAGGTCAAAATGTGTTATGGAAGAGAACAGTTTGGTAGACTATGTATGGAATTTACATGCTCAAAATTCATTGCTTGAGTGTGTTGACAAACAACTGAAAAACCAATTTGATGAGGAAGAAGCTAAGAGGGCATTGATGGTTGGATTAGCATGTTTGCATCCAGATTCCATGTTTAGGCCAAGGATGAGAAAAGTGGTGCACATTTTTCTGAATCCAAATGAACCTTTAATGGAATTACCAGGAATGAGACCCACTGGAGTTTATGTATCAGTTTCTTCTTGTACATCAATCACAGACTTTGGCTCTAGAGGTGAGTTACAGCTCCAATCATCCATAACATCATTGCACAAAAGTTCGATTTGTATGAAGTATGATCAGCAGTGA | 2976 | 0.4123 | MAKEVEGFKFEQRHGKERVRVARVWKAKDGRHFIVEWRVSISLLSDCVDSYLRDDNKDIVATDTMKNTVTLFFLLFQFFNFNFSVTSDYSLLYVNQISRSESACFLLYCEVYHFDSLGSLKVYAKAKECSEILSVEDFAIELAKHFTSFYKQVTTAIVNIVEKPWERVSVDGQPHQHGFKLGSEKHTAEAIVKKSGALQLTSGIEGFSLLKTTKSGFEGFIRDKYTALPETRERMLATEVTALWRYTYESLYSIPQKPLYFTDRYLDVKRVLTDTFFGSPKEGVYSPSVQSTLYQMAKAALNRFPDIASVQLKMPNIHFIPVNISNKDGPIVKFDDDVYLPTDEPHGSIQASLTRSWSRIPESCTNGELLCMGSATAGNGYISLTPEPQSSNASSVSSSVANKVGRVLYPHPVHAWPAVISTTFTLRISPFSRNSTSSGDGMALVFAQDNRPSPNDSYGSYLGMFDRSTQGGVFRQIAVEMDTFMNEFDPDGNHIGIVTTSITNTVASQSLNNTGVDLKSGRDIEVKVDYDGWTKMIYVSMGYPESQLKSVLNHSIILPDIIPSSVFVGFTASTGKTFPESHQVLNWVFTSVPLPVLSVKPSKLDTIKIILIIVIPVFLSASLVPLIWEVCKRRHERGNKKEDIESLSRTVPDNPKMFTYKQLSKATCNFRKENLLGRGGFGSVYKGIILDSGKIVAVKKVSATSKQGEREFLAEICTIGRLRHKNLVQLQGWCNEGQNLLLVYDYMQNGSLDRFIGKDILDWQTRHKILTGLASALLYLHEECGNPVVHRDVKPNNVMLDSNYNAHLGDFGLARLLKNEDSVTTNLAGTPGYLAPEVGFTGKATPESDVYSFGMVVLEVICGKRSKCVMEENSLVDYVWNLHAQNSLLECVDKQLKNQFDEEEAKRALMVGLACLHPDSMFRPRMRKVVHIFLNPNEPLMELPGMRPTGVYVSVSSCTSITDFGSRGELQLQSSITSLHKSSICMKYDQQ. | 992 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca8g04506 | 991 | SUPERFAMILY | Protein kinase-like (PK-like) | 652 | 952 | IPR011009 | - | |
Seca8g04506 | 991 | CDD | STKc_IRAK | 676 | 933 | - | - | |
Seca8g04506 | 991 | CDD | Uricase | 13 | 355 | - | - | |
Seca8g04506 | 991 | CDD | lectin_legume_LecRK_Arcelin_ConA | 365 | 591 | IPR001220 | GO:0030246 | |
Seca8g04506 | 991 | SUPERFAMILY | Concanavalin A-like lectins/glucanases | 357 | 592 | IPR013320 | - | |
Seca8g04506 | 991 | PRINTS | Uricase signature | 55 | 69 | IPR002042 | - | |
Seca8g04506 | 991 | PRINTS | Uricase signature | 15 | 26 | IPR002042 | - | |
Seca8g04506 | 991 | Pfam | Uricase | 122 | 189 | IPR002042 | - | |
Seca8g04506 | 991 | Pfam | Uricase | 201 | 350 | IPR002042 | - | |
Seca8g04506 | 991 | Pfam | Uricase | 13 | 69 | IPR002042 | - | |
Seca8g04506 | 991 | FunFam | probable L-type lectin-domain containing receptor kinase S.5 | 655 | 746 | - | - | |
Seca8g04506 | 991 | Pfam | Protein kinase domain | 671 | 931 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca8g04506 | 991 | PANTHER | - | 395 | 935 | - | - | |
Seca8g04506 | 991 | FunFam | probable L-type lectin-domain containing receptor kinase S.5 | 747 | 941 | - | - | |
Seca8g04506 | 991 | SUPERFAMILY | Tetrahydrobiopterin biosynthesis enzymes-like | 122 | 196 | - | - | |
Seca8g04506 | 991 | NCBIfam | urate oxidase | 122 | 355 | IPR002042 | - | |
Seca8g04506 | 991 | ProSiteProfiles | Protein kinase domain profile. | 670 | 934 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca8g04506 | 991 | SUPERFAMILY | Tetrahydrobiopterin biosynthesis enzymes-like | 10 | 73 | - | - | |
Seca8g04506 | 991 | Pfam | Legume lectin domain | 368 | 592 | IPR001220 | GO:0030246 | |
Seca8g04506 | 991 | SUPERFAMILY | Tetrahydrobiopterin biosynthesis enzymes-like | 196 | 356 | - | - | |
Seca8g04506 | 991 | Gene3D | Transferase(Phosphotransferase) domain 1 | 747 | 938 | - | - | |
Seca8g04506 | 991 | SMART | serkin_6 | 670 | 934 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca8g04506 | 991 | Gene3D | Phosphorylase Kinase; domain 1 | 655 | 746 | - | - | |
Seca8g04506 | 991 | FunFam | Putative L-type lectin-domain containing receptor kinase S.7 | 354 | 603 | - | - | |
Seca8g04506 | 991 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 788 | 800 | IPR008271 | GO:0004672|GO:0006468 | |
Seca8g04506 | 991 | ProSitePatterns | Protein kinases ATP-binding region signature. | 676 | 700 | IPR017441 | GO:0005524 | |
Seca8g04506 | 991 | Gene3D | - | 361 | 599 | - | - | |
Seca8g04506 | 991 | Gene3D | Urate Oxidase; | 9 | 360 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca8g04506 | Seca-Chr8 | 128091965 | 128101322 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca8g04506 | 362 | 969 | Receptor kinase-like Gene Family | AT5G55830 | 39.850 | 3.92e-123 | 389 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_L-LEC | Seca8g04506 | Pkinase | 6.4e-50 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca8g04506 | - | - | ccaj:109810929 | 973.385 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Seca8g04506 | 8 | 128091965 | 128101322 | Seca8g04506 | 8 | 128091965 | 128101322 | ECH |