Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04503 ATGTTCGTATCACGTGGGGTGAGGTCAGAGAGGCTCTTTTTCGAGCCTGGTAACACCACAAGCTCGATCTTGGAGAAGGCTAAGGCTGATAATGGTAATGGTGGGTTTCCATTGGAAGAAAATGGTGTTGTGTTGTTGGCTATGGAGTCAGAGGATCCATGTGGGGACTTAAGGAGGTCAATGGAGGAGATGGTGGAGAGTCATGAAGTGAAAGGTTGGAAAGGCTTGGAGGAGCTTTTGAGTTGGTATTTGATGGTGAATGATAAGAACAATCATGGGTTTATAGTGTTGGCTTTTGTAGATTTACTAATTAGTTTAGCAGCTGCTGCAGCAGCTGATGATGATGATGATGATTCTTGTTCTCATTATTCCACTTCTTCATATTTCTCAGCTGTTTCATCTTTTGCTTCTTCCTCATTGTGTCAATCAGAAGGTCAGAATGAAATTGTAGACCAGCATGAAGATACAGCGCGCAAGGTCTTATAG 486 0.428 MFVSRGVRSERLFFEPGNTTSSILEKAKADNGNGGFPLEENGVVLLAMESEDPCGDLRRSMEEMVESHEVKGWKGLEELLSWYLMVNDKNNHGFIVLAFVDLLISLAAAAAADDDDDDSCSHYSTSSYFSAVSSFASSSLCQSEGQNEIVDQHEDTARKVL. 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04503 161 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 8 106 IPR038933 GO:0045892
Seca8g04503 161 Pfam Transcriptional repressor, ovate 50 106 IPR006458 -
Seca8g04503 161 ProSiteProfiles OVATE domain profile. 46 105 IPR006458 -
Seca8g04503 161 NCBIfam uncharacterized plant-specific domain TIGR01568 44 107 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04503 Seca-Chr8 127957707 127958192 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Seca8g04503 Ovate 9.7e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04503 - - gmx:100527123 145.591