Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04472 ATGCAAGAATGGTATAAAGTACTGAACAGTGAGATATGGGATCTGCAAGATCATGAGAGTAATATTCTTCCAGCTTTGAGATTAAGTTACCATTACCTCCCTTCTCATTTAAAGAGGTGTTTTGCTTATTGTGCAATTTTCCCAAAAGATTATGAATTTGAAAAGGAGAACCTGATTTTGTTATGGATGGCAGAAGGTTTGCTCCAACAATCAAAGAGACATAGAAGAATTGAAGAAGTTGGAAATGAGTATTTTTGTGAATTAGTATCCAGATCATTTTTCCAACAATCAAGACGTGGCAAGTCATGTTTCTTAATGCATCATCTCATAAATGACTTAGCTCAGTTTGTTTCTGGAACATTTTCTGTCAAAATGGAAGGTAACAATTCTAATGAAATTGAGGAAAGAACTAGACATTTGTCCCACATTATTGCTCATAGTTCCTCATATGTAAACCTGAAAGATGTTAGCAAAGCAAATCACCTACGCACCTTTCTGCAAATAAGAACAATAGGTACATCCATTGACTTGTTCAACAACATGCCAAATGATCTGTTGACAAAGTTAAGGTACCTAAGGGTGTTATCTTTGGTAGGTGCATATTTCTATAGTTTACCTGATTCAATAGGTGAACTAAAACATCTGCGCTATCTAGAAGTGTTTGACACTGAGATTATCAGGTTACCTGAATCCATCTGCAGTTTGTACAATTTACAAACTCTGAAGTTAGTTGGATGTTATAAACTTATGGAACTGCCAACAGATATTCATAAACTTGTCAACTTGCGCTACTTGGATATTAGAGGCACTTGTTTGAAGTGGATGCCATTGCAAATCAGTGAGTTAAAAAGCCTCCAAAAGTTGAGTGACTTTTTTGTAGAAGAAGATTATGGATCTTCCATTGGTGAATTGGGAGAGCTATCTAATTTACATGGAGCATTGTTCATCCATTACATAGAAAATGTTGTTAATCACAAGGATTCTGAGAAGGCAAAGTTGAAGGAAAAGGATGGCCTTGAAAAGTTGTCTTTGGATTGGGGTGGGAATGGTGATACTGAGAACACAAAGCATGAAAAAGCCATACTAGACAGCCTGCAACCTCATACTAACTTGAAGGAGCTTGATATCTATGAGTATCCAGGCACAGAATTTCCAAATTGGTTGGGGGACTACTCCTTTTGCAACTTGGTGTCCTTACAACTTAAGGGCTGCAAATATTGCTATAAATTGCCTCCACTTGGACAACTTCCAATGTTGAAAGAGCTTCAGATTATTAAATTTGAAGGATTAGTGAATGTGGGGTCTGAGTTTTATGGAAATAGAACTTCTGTAGCTGATGAGAGGTACTTTCCTGCACTGGAAATTCTAAGGATTGAGTGTATGTCATCATGGGAGAAATGGTGTTCTGATGCTGAAAATGCAGGCAGTAGAGCTTTCTGTCACCTTAGAGAGCTTTATATTGAAAGCTGTCCCAAGCTGACAGGGGATTTACCATGTAACCTTCCATCTTTGACATTACTTGTAATCAGAGATTGCAAACGTTTGCTTTGTTCACTTCCCAAAGCTCCACTTCTGCGTGTGCTAAACATTCAGAATTGTGAGAAGCTAGAATTCCCAGTACATGCACCTTGGTATCACCAATCACTGACATCTTTGTACTTACATGATAGCTGTGACTCACTAATGTTCTTGCCATTAGATCTCTTCCCCAATCTCAAGTCTCTAGATATTTGGGGATGTAAAAATCTTGAAGCACTTACTGTTTCAGAATCAGATTCAACTCCTCAAAATCTCAAATCCCTTCATTCATTGTGCATAAGGCATTGTCCAAATTTCATATCATTTCCCAAGGGAGGATTTGAAGCCCCAATGCTCACTTTATTAACCATCAACTACTGTGAGAAGTTGAATTCTCTGCCTGAAAAAATGCATGACCTTATGCCAAGCTTGAAAGAACTTCAACTGAGGGGTTGTCCACAAATTGAGTCATCTACTATGAGGCCACTCAGGATTCGGATTTGCAACAAACTCATGGAAGGGAAACAAAACCACTCTGATCCTCTCTTTGCAAGGTTGAAGGGTCTGGCCTCTATTCATAGTCCCTCATCAAGTTAG 2115 0.3825 MQEWYKVLNSEIWDLQDHESNILPALRLSYHYLPSHLKRCFAYCAIFPKDYEFEKENLILLWMAEGLLQQSKRHRRIEEVGNEYFCELVSRSFFQQSRRGKSCFLMHHLINDLAQFVSGTFSVKMEGNNSNEIEERTRHLSHIIAHSSSYVNLKDVSKANHLRTFLQIRTIGTSIDLFNNMPNDLLTKLRYLRVLSLVGAYFYSLPDSIGELKHLRYLEVFDTEIIRLPESICSLYNLQTLKLVGCYKLMELPTDIHKLVNLRYLDIRGTCLKWMPLQISELKSLQKLSDFFVEEDYGSSIGELGELSNLHGALFIHYIENVVNHKDSEKAKLKEKDGLEKLSLDWGGNGDTENTKHEKAILDSLQPHTNLKELDIYEYPGTEFPNWLGDYSFCNLVSLQLKGCKYCYKLPPLGQLPMLKELQIIKFEGLVNVGSEFYGNRTSVADERYFPALEILRIECMSSWEKWCSDAENAGSRAFCHLRELYIESCPKLTGDLPCNLPSLTLLVIRDCKRLLCSLPKAPLLRVLNIQNCEKLEFPVHAPWYHQSLTSLYLHDSCDSLMFLPLDLFPNLKSLDIWGCKNLEALTVSESDSTPQNLKSLHSLCIRHCPNFISFPKGGFEAPMLTLLTINYCEKLNSLPEKMHDLMPSLKELQLRGCPQIESSTMRPLRIRICNKLMEGKQNHSDPLFARLKGLASIHSPSSS. 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04472 704 Gene3D Ribonuclease Inhibitor 148 533 IPR032675 -
Seca8g04472 704 SUPERFAMILY L domain-like 106 514 - -
Seca8g04472 704 Gene3D - 24 116 IPR036388 -
Seca8g04472 704 SUPERFAMILY RNI-like 450 664 - -
Seca8g04472 704 Gene3D Ribonuclease Inhibitor 546 678 IPR032675 -
Seca8g04472 704 FunFam Probable disease resistance protein At1g63360 30 116 - -
Seca8g04472 704 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 44 IPR027417 -
Seca8g04472 704 PANTHER DISEASE RESISTANCE PROTEIN RP 2 464 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04472 Seca-Chr8 127295298 127297412 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04472 192 301 WRKY Transcription Factor Family AT4G12020 35.088 5.35e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04472 - - vum:124831962 1169.07