Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04458 ATGAATTTTGCTCAGAACTTGTTTGATGAGAAGCCTCTACTCTTTCTGTTCAATATCAATTTTCCATTGGAACCATTTGGGTTAGAACCAAATGTAGCGTTGACAGAGCAGGTCCTTGTTTCTGTGTCTGAAGGTTGCCCCAAGCTCCAATCAGTTCTATATTTTTGTCGTCAAATATCTAATGCTAATGCTGCTCTAAGTACAATTGCCCAGAACATGCTTAATATGACTCGTTTTCGACTTTGTATTATTGAGCCTAAGACTCCTGACTATCTTACCCTTCAACCTCAGGAAACTAGTTTTGGAGCTATTGTACAGCATTGCAAGAATCTTCAGCGCCTTTCCCTTTCTGGGCTTCTTACTGACCGTGTCTTTGAATACATTGGGACTTATGCGAAGAAGCTTGAGATGCTTTCTGTGGCTTTTGCTGGAGATAGTGATTTGGGTCTCCATCATGTGCTTTCTGGGTGTGATAACCTTAAGAAGATGGAGATCAGGGACTGCCCGTTTGGTGACAAAGCCCTTTTGGACAATGCTGCAAAACTGGAGACAATGCAAATCCTCTTCTCAATGGCTCTCTGTTTCCCTGCCCAGGCGCTTGGTGCTGCAGGGGGTGCAATTGCAATTATGGAAGTAATTCCTTCGAAATACAAGCACATGATGCGGGGGCCTTCTTTGAAAATGGACTTGCATTTTGAAAATGGATTAGAGCATGGGTTTGAAGTCTGCCATCCTTCATGTTTGATTTCCATGTCTTGTTGTTCCTTTTTCTTGTTGGGATTATGTTGTTGTTTCTTCCATTTTGTTGAGTTCATCTCTTGGTTTCAAGTTGATATGCGGGAGGGTGTTATAATATACAAATTCTGTTTAGGAAAATCAAGAGAGAATAAGTTTGTTATTTTTACTTTAGTTAGTTTTTCTACCATAGTTACTAATACCCACTAA 945 0.4042 MNFAQNLFDEKPLLFLFNINFPLEPFGLEPNVALTEQVLVSVSEGCPKLQSVLYFCRQISNANAALSTIAQNMLNMTRFRLCIIEPKTPDYLTLQPQETSFGAIVQHCKNLQRLSLSGLLTDRVFEYIGTYAKKLEMLSVAFAGDSDLGLHHVLSGCDNLKKMEIRDCPFGDKALLDNAAKLETMQILFSMALCFPAQALGAAGGAIAIMEVIPSKYKHMMRGPSLKMDLHFENGLEHGFEVCHPSCLISMSCCSFFLLGLCCCFFHFVEFISWFQVDMREGVIIYKFCLGKSRENKFVIFTLVSFSTIVTNTH. 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04458 314 Gene3D Ribonuclease Inhibitor 14 194 IPR032675 -
Seca8g04458 314 SUPERFAMILY RNI-like 26 188 - -
Seca8g04458 314 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 40 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04458 Seca-Chr8 127062073 127063017 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04458 188 231 Major Intrinsic Protein MIP AT3G04090 70.455 7.15e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04458 K14485 - gmx:100816241 285.804