Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04456 ATGCCTTACATCGACTGCTCCAACGTTTGCACACATTTAACGTTGGGTACATGTCCTTGTACTACCACGACAGAATCTGGTTCTTCCAGCAAGAAAGGGAAACATGATGATGAAGCACACATTGGTTCAACAAAGAAGGCGTGCAGCAATGAAGTGGACAGAAGGTGGGGTTACTCAACAGAGTTGATGTTGTATGATGACCCTTGGAAGATCAAGAAAATCCTCAAAGAAAGCTATCTTGGCAACATGAGCAGACTTTTGCTGGGAAGAGATTTGGCACAAGAATTGGTGCTGCCTGTGTTGGGTGCTGATACTGATCTTGATAATGGAACTCAAGTCTCGATTTGGGATGTTGACACCAACTCCATGCATTCCCTCCTTTTCAAGAGATGGGTTTCTTCAAGAAGCTATGTTTTCATTGGCAGCTGGGTCCAAGATTTTGTTATCAGAAGAGCCTTAAAGAAAGGAGATGAGATTGGCCTTCTGGGATCCATACAACAATCACTTCAATTTCACTGTTCTTAA 525 0.4305 MPYIDCSNVCTHLTLGTCPCTTTTESGSSSKKGKHDDEAHIGSTKKACSNEVDRRWGYSTELMLYDDPWKIKKILKESYLGNMSRLLLGRDLAQELVLPVLGADTDLDNGTQVSIWDVDTNSMHSLLFKRWVSSRSYVFIGSWVQDFVIRRALKKGDEIGLLGSIQQSLQFHCS. 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04456 174 SUPERFAMILY DNA-binding pseudobarrel domain 67 160 IPR015300 -
Seca8g04456 174 Gene3D - 68 174 IPR015300 -
Seca8g04456 174 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 20 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04456 Seca-Chr8 127048253 127048862 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04456 53 166 B3 DNA Binding Superfamily AT3G24650 28.070 3.56e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04456 - - lang:109331497 171.785