Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04452 ATGGCTTACACAGACTGTTCGAACGTTTGCACACATTTAACGTTGGGTACATGTGTTTGGTGTCGCACCGTAACCAAAACAGAGACCAAACCCAATGTTTGCGTGGATTTATCACTTGGTGTGTGTCTTTGTACCACGACAGAATCTGGTTCTTCCAGCAAGAAAAGGAAACATGACCACAAAGCACACATTGGTTCAAGAAAGAAGGCGTGCAGCAATGAAGTGGACAGAAGGTGGGGTTACTCAACAGAGTTGATGCTATATGATGACCCTTGGAAGATCAAGAAAGTCCTCAAAGAGAGTGATCTTGGCAACATGAGCAGACTCTTGCTCGGTAGAGATTTGGCACAAGAATTGGTGCTGTCTGTGTTGGGTGCTGATGCTGATCTTGACAATGGAACTCAAGTCATGATAAAGGACGTGGACACCAACTCCATGCATTCCCTGCTTTTCAAGAAATGGGTTTCTTCAAGAAGCTATGTTTTCATTGGTAGCTGGGTCCAAGATTTTGTCATTAGAAGAGCCTTAAAGAAAGGAGATGAGATTGGCCTTCACTGGGATCCATACAACAATCTCTTCAATTTCTCTGTTCTTAAGGCCATTTAG 606 0.4356 MAYTDCSNVCTHLTLGTCVWCRTVTKTETKPNVCVDLSLGVCLCTTTESGSSSKKRKHDHKAHIGSRKKACSNEVDRRWGYSTELMLYDDPWKIKKVLKESDLGNMSRLLLGRDLAQELVLSVLGADADLDNGTQVMIKDVDTNSMHSLLFKKWVSSRSYVFIGSWVQDFVIRRALKKGDEIGLHWDPYNNLFNFSVLKAI. 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04452 201 CDD B3_DNA 92 199 IPR003340 GO:0003677
Seca8g04452 201 Gene3D - 91 197 IPR015300 -
Seca8g04452 201 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 51 199 - -
Seca8g04452 201 SUPERFAMILY DNA-binding pseudobarrel domain 90 193 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04452 Seca-Chr8 126986480 126987085 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04452 76 187 B3 DNA Binding Superfamily AT3G24650 27.679 3.10e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04452 - - aprc:113850604 223.016